RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 PRAMEF18Q5VWM3 479 aa14.94□□□□□ -0.02
SLC3A2-220ENST00000542922 ALKBH5Q6P6C2 394 aaKnown RBP14.94□□□□□ -0.02
SLC3A2-220ENST00000542922 LNX1Q8TBB1 728 aaPredicted RBP14.94□□□□□ -0.02
SLC3A2-220ENST00000542922 RIN2Q8WYP3 895 aaPredicted RBP14.94□□□□□ -0.02
SLC3A2-220ENST00000542922 GPR88Q9GZN0 384 aa14.94□□□□□ -0.02
SLC3A2-220ENST00000542922 GPRC5CQ9NQ84 441 aa14.94□□□□□ -0.02
SLC3A2-220ENST00000542922 BRCA1P38398 1863 aaKnown RBP14.94□□□□□ -0.02
SLC3A2-220ENST00000542922 MUTP22033 750 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 RARRES1P49788 294 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 NBPF12Q5TAG4 269 aaPredicted RBP14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 PCNX4Q63HM2 1172 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 HS2ST1Q7LGA3 356 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 SYCP3Q8IZU3 236 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 TXLNBQ8N3L3 684 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 RPAP3Q9H6T3 665 aaPredicted RBP14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 LUC7LQ9NQ29 371 aaKnown RBP14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 ADAM21Q9UKJ8 722 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 RIPK3Q9Y572 518 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 DOCK5Q9H7D0 1870 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 UBE4BO95155 1302 aa14.93□□□□□ -0.02
SLC3A2-220ENST00000542922 GTPBP10A4D1E9 387 aaKnown RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 ZSCAN5CA6NGD5 496 aaPredicted RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 F8VZ95 297 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 EVI5O60447 810 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 EIF3JO75822 258 aaKnown RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 P4HBP07237 508 aaKnown RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 ITIH3Q06033 890 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 PGM5Q15124 567 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 PLA2G4FQ68DD2 849 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 AENQ8WTP8 325 aaKnown RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 JDP2Q8WYK2 163 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 LPAR1Q92633 364 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 ATG4CQ96DT6 458 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 INPP4AQ96PE3 977 aaPredicted RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 CBWD1Q9BRT8 395 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 INTS2Q9H0H0 1204 aaKnown RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 VPS33BQ9H267 617 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 KCND2Q9NZV8 630 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 PPP1R9AQ9ULJ8 1098 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 BACH1O14867 736 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 EXOC3O60645 756 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 CCNE2O96020 404 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 ZNF280AP59817 542 aaPredicted RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 DRAP1Q14919 205 aaPredicted RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 MICALL2Q8IY33 904 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 MSL3Q8N5Y2 521 aaKnown RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 U2AF1L4Q8WU68 220 aaKnown RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 MKNK1Q9BUB5 465 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 HACL1Q9UJ83 578 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 FBXL5Q9UKA1 691 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 DNAJC12Q9UKB3 198 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 FRMD4BQ9Y2L6 1034 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 TELO2Q9Y4R8 837 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 WDR81Q562E7 1941 aa14.92□□□□□ -0.02
SLC3A2-220ENST00000542922 TMCO5BA8MYB1 307 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 SYF2O95926 243 aaKnown RBP14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 PAFAH1B1P43034 410 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 NOP2P46087 812 aaKnown RBP14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 MYL7Q01449 175 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 GHRHRQ02643 423 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 NSMFQ6X4W1 530 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 MCF2L2Q86YR7 1114 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 LRRC57Q8N9N7 239 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 DOCK1Q14185 1865 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 RLFQ13129 1914 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 KIAA1217Q5T5P2 1943 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 IGSF9BQ9UPX0 1349 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 PPP1R12BO60237 982 aaPredicted RBP14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 MCM3P25205 808 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 SOX5P35711 763 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 QARSP47897 775 aaKnown RBP14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 NPEPPSP55786 919 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 BFSP1Q12934 665 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 MAP9Q49MG5 647 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 CFAP221Q4G0U5 840 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 DALRD3Q5D0E6 543 aaKnown RBP14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 NIPA1Q7RTP0 329 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 PALB2Q86YC2 1186 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 GLYCTKQ8IVS8 523 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 NEK9Q8TD19 979 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 PLEKHO2Q8TD55 490 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 ZKSCAN4Q969J2 545 aaPredicted RBP14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 TRERF1Q96PN7 1200 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 RMDN3Q96TC7 470 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.91□□□□□ -0.026e-17■■■■■ 80.7
SLC3A2-220ENST00000542922 TSKSQ9UJT2 592 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 BZW2Q9Y6E2 419 aaKnown RBP14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 GJA3Q9Y6H8 435 aa14.91□□□□□ -0.02
SLC3A2-220ENST00000542922 ESYT3A0FGR9 886 aa14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 CTNND1O60716 968 aaKnown RBP14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 YWHABP31946 246 aaKnown RBP14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 STAT1P42224 750 aa14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 BAG6P46379 1132 aa14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 FAM193AP78312 1265 aa14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 GPS2Q13227 327 aa14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 ARHGAP44Q17R89 818 aa14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 PHLDB3Q6NSJ2 640 aa14.9□□□□□ -0.02
SLC3A2-220ENST00000542922 C8orf74Q6P047 294 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms