RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TRIM61Q5EBN2 209 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 FSTL4Q6MZW2 842 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 TCTN3Q6NUS6 607 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 TAX1BP1Q86VP1 789 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 WDR48Q8TAF3 677 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 THAP3Q8WTV1 239 aaPredicted RBP7.13□□□□□ -1.27
XRCC4-206ENST00000542685 NEIL1Q96FI4 390 aaPredicted RBP7.13□□□□□ -1.27
XRCC4-206ENST00000542685 CELF4Q9BZC1 486 aaKnown RBP7.13□□□□□ -1.27
XRCC4-206ENST00000542685 CDC42EP3Q9UKI2 254 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 BCORL1Q5H9F3 1711 aa7.13□□□□□ -1.27
XRCC4-206ENST00000542685 LRPPRCP42704 1394 aaKnown RBP7.12□□□□□ -1.27
XRCC4-206ENST00000542685 IBTKQ9P2D0 1353 aaPredicted RBP7.12□□□□□ -1.27
XRCC4-206ENST00000542685 FRAT2O75474 233 aaPredicted RBP7.12□□□□□ -1.27
XRCC4-206ENST00000542685 HMGCRP04035 888 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 SELENOPP49908 381 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 RNF151Q2KHN1 245 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 TM4SF20Q53R12 229 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 DNTTIP2Q5QJE6 756 aaKnown RBP7.12□□□□□ -1.27
XRCC4-206ENST00000542685 LRSAM1Q6UWE0 723 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 OTOP2Q7RTS6 562 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 BRAPQ7Z569 592 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 FGD2Q7Z6J4 655 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 CREBRFQ8IUR6 639 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 NOSTRINQ8IVI9 506 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 ZNF830Q96NB3 372 aaPredicted RBP7.12□□□□□ -1.27
XRCC4-206ENST00000542685 GEMIN8Q9NWZ8 242 aaKnown RBP7.12□□□□□ -1.27
XRCC4-206ENST00000542685 PTCH2Q9Y6C5 1203 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 ADAMTS12P58397 1594 aa7.12□□□□□ -1.27
XRCC4-206ENST00000542685 DAPK1P53355 1430 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 CLSTN1O94985 981 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 XRCC6P12956 609 aaKnown RBP eCLIP7.11□□□□□ -1.27
XRCC4-206ENST00000542685 MCM5P33992 734 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 ECE1P42892 770 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 ETV4P43268 484 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 BECN1Q14457 450 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 C2orf27AQ580R0 203 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 ZMAT1Q5H9K5 638 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 OVCH1Q7RTY7 1134 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 LILRB2Q8N423 598 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 JMYQ8N9B5 988 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 HIPK4Q8NE63 616 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 ASB15Q8WXK1 588 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 WNK4Q96J92 1243 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 BTBD2Q9BX70 525 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 AMNQ9BXJ7 453 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 ZDHHC5Q9C0B5 715 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 KCNH7Q9NS40 1196 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 ZFR2Q9UPR6 939 aaKnown RBP7.11□□□□□ -1.27
XRCC4-206ENST00000542685 TARBP1Q13395 1621 aaKnown RBP7.11□□□□□ -1.27
XRCC4-206ENST00000542685 CEP170Q5SW79 1584 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 SHANK2Q9UPX8 1470 aa7.11□□□□□ -1.27
XRCC4-206ENST00000542685 CCDC163A0A0D9SF12 145 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 TCRBV16S1A1N1A0A5B0 115 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 MUSKO15146 869 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 FOXP2O15409 715 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 MPIG6BO95866 241 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 RIPK4P57078 832 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 CD83Q01151 205 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 CCDC173Q0VFZ6 552 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 TMEM132BQ14DG7 1078 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 ABHD17CQ6PCB6 329 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 CXXC5Q7LFL8 322 aaKnown RBP7.1□□□□□ -1.27
XRCC4-206ENST00000542685 ZSCAN30Q86W11 494 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 TICAM2Q86XR7 235 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 IGSF22Q8N9C0 903 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 GBP4Q96PP9 640 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 MRPL4Q9BYD3 311 aaKnown RBP7.1□□□□□ -1.27
XRCC4-206ENST00000542685 KIAA1683Q9H0B3 1180 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 FBXO10Q9UK96 956 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 ZHX1Q9UKY1 873 aaPredicted RBP7.1□□□□□ -1.27
XRCC4-206ENST00000542685 NR2E1Q9Y466 385 aa7.1□□□□□ -1.27
XRCC4-206ENST00000542685 BRD4O60885 1362 aaPredicted RBP7.09□□□□□ -1.27
XRCC4-206ENST00000542685 ZMYM3Q14202 1370 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 SLC12A8A0AV02 714 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 PRAMEF22A3QJZ6 481 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 FSHBP01225 129 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 KCNA6P17658 529 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 R3HDM1Q15032 1099 aaKnown RBP7.09□□□□□ -1.27
XRCC4-206ENST00000542685 STILQ15468 1287 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 TMEM177Q53S58 311 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 SPDYAQ5MJ70 313 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 LARP4Q71RC2 724 aaKnown RBP eCLIP7.09□□□□□ -1.27
XRCC4-206ENST00000542685 C2orf69Q8N8R5 385 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 ERCC4Q92889 916 aaPredicted RBP7.09□□□□□ -1.27
XRCC4-206ENST00000542685 SCYL1Q96KG9 808 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 DPYSL5Q9BPU6 564 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 OSBPL2Q9H1P3 480 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 OR10A5Q9H207 317 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 C12orf65Q9H3J6 166 aaKnown RBP7.09□□□□□ -1.27
XRCC4-206ENST00000542685 NCOA5Q9HCD5 579 aaKnown RBP7.09□□□□□ -1.27
XRCC4-206ENST00000542685 PZPP20742 1482 aa7.09□□□□□ -1.27
XRCC4-206ENST00000542685 KIF7Q2M1P5 1343 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 CLASP1Q7Z460 1538 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 RASSF10A6NK89 507 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 ZNF500O60304 480 aaPredicted RBP7.08□□□□□ -1.28
XRCC4-206ENST00000542685 CDC14BO60729 498 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 HIP1RO75146 1068 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 CR2P20023 1033 aa7.08□□□□□ -1.28
XRCC4-206ENST00000542685 EIF4HQ15056 248 aaKnown RBP7.08□□□□□ -1.28
XRCC4-206ENST00000542685 RALBP1Q15311 655 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms