RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 GAS2L1Q99501 681 aaPredicted RBP22.42■■□□□ 1.18
CACNA2D4-215ENST00000542340 GCOM2Q9BZD3 368 aaPredicted RBP22.42■■□□□ 1.18
CACNA2D4-215ENST00000542340 CDH23Q9H251 3354 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 LINC01553A4QN01 128 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 ZNF410Q86VK4 478 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 RHPN2Q8IUC4 686 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 CRIPAKQ8N1N5 446 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 TCP11Q8WWU5 503 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 ZNF668Q96K58 619 aaPredicted RBP22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 RAB34Q9BZG1 259 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 RGS18Q9NS28 235 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 LRWD1Q9UFC0 647 aa22.41■■□□□ 1.18
CACNA2D4-215ENST00000542340 TTC3P53804 2025 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 MGEA5O60502 916 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 MED24O75448 989 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 MUTP22033 750 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 RARRES1P49788 294 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 EMC2Q15006 297 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 HAUS3Q68CZ6 603 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 BRAPQ7Z569 592 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 NPAS4Q8IUM7 802 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 IGSF22Q8N9C0 903 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 PSPC1Q8WXF1 523 aaKnown RBP22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 TMEM143Q96AN5 459 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 NACC1Q96RE7 527 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 TGS1Q96RS0 853 aaKnown RBP22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 ADAM2Q99965 735 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 CERS4Q9HA82 394 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 C1orf112Q9NSG2 853 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 RNF216Q9NWF9 866 aaPredicted RBP22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 STK24Q9Y6E0 443 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 MYO9BQ13459 2157 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 COL6A3P12111 3177 aa22.4■■□□□ 1.18
CACNA2D4-215ENST00000542340 A0A087WZ62 844 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 DENND3A2RUS2 1198 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 ASAP2O43150 1006 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 DGAT1O75907 488 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 STAG3L1P0CL83 205 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 ERVK-21P61565 698 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 ATP2C1P98194 919 aaPredicted RBP22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 DSC3Q14574 896 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 DTHD1Q6ZMT9 781 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 SLC24A5Q71RS6 500 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 PIGOQ8TEQ8 1089 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 PRPF31Q8WWY3 499 aaKnown RBP22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 ARNTL2Q8WYA1 636 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 CCDC43Q96MW1 224 aaKnown RBP22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 MTRQ99707 1265 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 FDXACB1Q9BRP7 624 aaPredicted RBP22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 INO80BQ9C086 356 aaPredicted RBP22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 COL4A3BPQ9Y5P4 624 aa22.39■■□□□ 1.17
CACNA2D4-215ENST00000542340 VPS37CA5D8V6 355 aaPredicted RBP22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 DGKIO75912 1065 aa22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 SARSP49591 514 aaKnown RBP22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 ADGRE1Q14246 886 aa22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 KSR1Q8IVT5 923 aa22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 ZNF689Q96CS4 500 aaPredicted RBP22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 RC3H2Q9HBD1 1191 aaKnown RBP22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 XPNPEP1Q9NQW7 623 aa22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 DBR1Q9UK59 544 aaKnown RBP22.38■■□□□ 1.17
CACNA2D4-215ENST00000542340 COL4A6Q14031 1691 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 A0A087WWV3 80 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 C9IYK1 514 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 SYT1P21579 422 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 FAM189BP81408 668 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 LAMTOR4Q0VGL1 99 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 IL17AQ16552 155 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 SPRED2Q7Z698 418 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 MAFAQ8NHW3 353 aaPredicted RBP22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 NLRP4Q96MN2 994 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 ATP6V0A4Q9HBG4 840 aa22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 BMP2KQ9NSY1 1161 aaPredicted RBP22.37■■□□□ 1.17
CACNA2D4-215ENST00000542340 ZSCAN20P17040 1043 aaPredicted RBP22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 SFPQP23246 707 aaKnown RBP eCLIP22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 CCT6AP40227 531 aaKnown RBP22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 MXD4Q14582 209 aaPredicted RBP22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 ARL6IP4Q66PJ3 421 aaKnown RBP22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 POTEGQ6S5H5 508 aa22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 FERMT3Q86UX7 667 aa22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 HSCBQ8IWL3 235 aa22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 SAMD11Q96NU1 681 aa22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 IFT122Q9HBG6 1241 aa22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 LRFN2Q9ULH4 789 aa22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 PCDHB7Q9Y5E2 793 aa22.36■■□□□ 1.17
CACNA2D4-215ENST00000542340 ADGRA3Q8IWK6 1321 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 TRANK1O15050 2925 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 EPOPA6NHQ4 379 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 RFXAPO00287 272 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 CSDE1O75534 798 aaKnown RBP22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 SRGAP2CP0DJJ0 459 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 POU3F3P20264 500 aaPredicted RBP22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 FGFR4P22455 802 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 IGFBP4P22692 258 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 KRT79Q5XKE5 535 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 FIBCD1Q8N539 461 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 ELAC1Q9H777 363 aaKnown RBP22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 CHST12Q9NRB3 414 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 FOXD4L1Q9NU39 408 aa22.35■■□□□ 1.17
CACNA2D4-215ENST00000542340 ARID2Q68CP9 1835 aa22.34■■□□□ 1.17
CACNA2D4-215ENST00000542340 BMP15O95972 392 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms