RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 ZNF668Q96K58 619 aaPredicted RBP22.7■■□□□ 1.22
DDB1-220ENST00000542337 INO80BQ9C086 356 aaPredicted RBP22.7■■□□□ 1.22
DDB1-220ENST00000542337 CLDND1Q9NY35 253 aa22.7■■□□□ 1.22
DDB1-220ENST00000542337 SUCLA2Q9P2R7 463 aaPredicted RBP22.7■■□□□ 1.22
DDB1-220ENST00000542337 VAV3Q9UKW4 847 aa22.7■■□□□ 1.22
DDB1-220ENST00000542337 EML1O00423 815 aa22.69■■□□□ 1.22
DDB1-220ENST00000542337 DTNBO60941 627 aa22.69■■□□□ 1.22
DDB1-220ENST00000542337 FDPSP14324 419 aaKnown RBP22.69■■□□□ 1.22
DDB1-220ENST00000542337 CSPP1Q1MSJ5 1256 aa22.69■■□□□ 1.22
DDB1-220ENST00000542337 FAM102BQ5T8I3 360 aa22.69■■□□□ 1.22
DDB1-220ENST00000542337 ABI1Q8IZP0 508 aa22.69■■□□□ 1.22
DDB1-220ENST00000542337 DACT1Q9NYF0 836 aa22.69■■□□□ 1.22
DDB1-220ENST00000542337 PPME1Q9Y570 386 aa22.69■■□□□ 1.22
DDB1-220ENST00000542337 RALGAPA2Q2PPJ7 1873 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 MAFO75444 373 aaPredicted RBP22.68■■□□□ 1.22
DDB1-220ENST00000542337 CSPG5O95196 566 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 STBD1O95210 358 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 ITGB1P05556 798 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 NR5A1Q13285 461 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 EPHA7Q15375 998 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 PTCRAQ6ISU1 281 aaPredicted RBP22.68■■□□□ 1.22
DDB1-220ENST00000542337 OTUD6AQ7L8S5 288 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 NSUN7Q8NE18 718 aaKnown RBP22.68■■□□□ 1.22
DDB1-220ENST00000542337 SPPL3Q8TCT6 385 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 NEK9Q8TD19 979 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 SLC7A3Q8WY07 619 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 TMEM117Q9H0C3 514 aa22.68■■□□□ 1.22
DDB1-220ENST00000542337 EVPLQ92817 2033 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 IGKV6-21A0A0C4DH24 114 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 TMEM150BA6NC51 233 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 H3BQ06 376 aaPredicted RBP22.67■■□□□ 1.22
DDB1-220ENST00000542337 LARGE1O95461 756 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 SFPQP23246 707 aaKnown RBP eCLIP22.67■■□□□ 1.22
DDB1-220ENST00000542337 SAFBQ15424 915 aaKnown RBP eCLIP22.67■■□□□ 1.22
DDB1-220ENST00000542337 NCAPH2Q6IBW4 605 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 ANO5Q75V66 913 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 ZNF410Q86VK4 478 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 POTEDQ86YR6 584 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 RHPN2Q8IUC4 686 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.67■■□□□ 1.22
DDB1-220ENST00000542337 POF1BQ8WVV4 589 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 HAS1Q92839 578 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 CEP170P1Q96L14 293 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 SH2D3AQ9BRG2 576 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 IGFLR1Q9H665 355 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 CYP26B1Q9NR63 512 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 CHST12Q9NRB3 414 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 TYW1Q9NV66 732 aaKnown RBP22.67■■□□□ 1.22
DDB1-220ENST00000542337 LIMCH1Q9UPQ0 1083 aa22.67■■□□□ 1.22
DDB1-220ENST00000542337 SEC24BO95487 1268 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 EOMESO95936 686 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 FGFR1P11362 822 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 LAG3P18627 525 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 UBE3AQ05086 875 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 DRP2Q13474 957 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 EARS2Q5JPH6 523 aaKnown RBP22.66■■□□□ 1.22
DDB1-220ENST00000542337 ECHDC2Q86YB7 292 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 THNSL1Q8IYQ7 743 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 RNF169Q8NCN4 708 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 MICAL1Q8TDZ2 1067 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 CEP89Q96ST8 783 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 ZSWIM4Q9H7M6 989 aa22.66■■□□□ 1.22
DDB1-220ENST00000542337 TCF20Q9UGU0 1960 aaKnown RBP22.66■■□□□ 1.22
DDB1-220ENST00000542337 NLRC5Q86WI3 1866 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 A0A087WZ62 844 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 GRXCR2A6NFK2 248 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 JAK2O60674 1132 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 RFC5P40937 340 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 FOSBP53539 338 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 POLGP54098 1239 aaPredicted RBP22.65■■□□□ 1.22
DDB1-220ENST00000542337 HYAL1Q12794 435 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 COL19A1Q14993 1142 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 PLA2G4FQ68DD2 849 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 C4orf19Q8IY42 314 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 DIS3L2Q8IYB7 885 aaKnown RBP22.65■■□□□ 1.22
DDB1-220ENST00000542337 FDXACB1Q9BRP7 624 aaPredicted RBP22.65■■□□□ 1.22
DDB1-220ENST00000542337 PCDHA12Q9UN75 941 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 LOXHD1Q8IVV2 1947 aa22.65■■□□□ 1.22
DDB1-220ENST00000542337 A0A0U1RQF3 1178 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 BTBD18B2RXH4 712 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 SKIP12755 728 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 FGFR4P22455 802 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 CALCRLQ16602 461 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 TNFRSF25Q93038 417 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 NLRP4Q96MN2 994 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 LXNQ9BS40 222 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 C1QTNF1Q9BXJ1 281 aa22.64■■□□□ 1.21
DDB1-220ENST00000542337 PUF60Q9UHX1 559 aaKnown RBP22.64■■□□□ 1.21
DDB1-220ENST00000542337 FAM205CA6NFA0 338 aa22.63■■□□□ 1.21
DDB1-220ENST00000542337 GAS2O43903 313 aaKnown RBP22.63■■□□□ 1.21
DDB1-220ENST00000542337 CSDE1O75534 798 aaKnown RBP22.63■■□□□ 1.21
DDB1-220ENST00000542337 FGF18O76093 207 aa22.63■■□□□ 1.21
DDB1-220ENST00000542337 DNAJB1P25685 340 aa22.63■■□□□ 1.21
DDB1-220ENST00000542337 YWHABP31946 246 aaKnown RBP22.63■■□□□ 1.21
DDB1-220ENST00000542337 NPEPPSP55786 919 aa22.63■■□□□ 1.21
DDB1-220ENST00000542337 CAMK1Q14012 370 aa22.63■■□□□ 1.21
DDB1-220ENST00000542337 TPH2Q8IWU9 490 aa22.63■■□□□ 1.21
DDB1-220ENST00000542337 LRRC43Q8N309 656 aa22.63■■□□□ 1.21
DDB1-220ENST00000542337 COLGALT1Q8NBJ5 622 aa22.63■■□□□ 1.21
DDB1-220ENST00000542337 TCP11Q8WWU5 503 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms