RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ABI1Q8IZP0 508 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 LRRC43Q8N309 656 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 HELQQ8TDG4 1101 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 BCL7CQ8WUZ0 217 aaPredicted RBP11.22□□□□□ -0.61
CHFR-220ENST00000541817 SEPT1Q8WYJ6 367 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 PCYT2Q99447 389 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 SEMA4GQ9NTN9 838 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 LHX6Q9UPM6 363 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 PCDHA2Q9Y5H9 948 aa11.22□□□□□ -0.61
CHFR-220ENST00000541817 DOCK8Q8NF50 2099 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 EVPLQ92817 2033 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 MYH15Q9Y2K3 1946 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 CCDC195A0A1B0GUA6 201 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 KANSL1LA0AUZ9 987 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 RRN3P2A6NIE6 340 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 FGAP02671 866 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 CTSAP10619 480 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 DSC3Q14574 896 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 PRR23CQ6ZRP0 262 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 FAM228AQ86W67 206 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 TMEM169Q96HH4 297 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 OSMRQ99650 979 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
CHFR-220ENST00000541817 SMARCAD1Q9H4L7 1026 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 EPS15L1Q9UBC2 864 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 NUMBLQ9Y6R0 609 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 ZFYVE26Q68DK2 2539 aa11.21□□□□□ -0.61
CHFR-220ENST00000541817 NBEAQ8NFP9 2946 aa11.21□□□□□ -0.62
CHFR-220ENST00000541817 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 PARP1P09874 1014 aaKnown RBP11.2□□□□□ -0.62
CHFR-220ENST00000541817 CLCN4P51793 760 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 BMS1Q14692 1282 aaKnown RBP11.2□□□□□ -0.62
CHFR-220ENST00000541817 KIZQ2M2Z5 673 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 LONRF3Q496Y0 759 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 ASPRV1Q53RT3 343 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 IL31Q6EBC2 164 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 MTHFD1LQ6UB35 978 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 GET4Q7L5D6 327 aaPredicted RBP11.2□□□□□ -0.62
CHFR-220ENST00000541817 TBC1D10CQ8IV04 446 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 NELL1Q92832 810 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 KLHL5Q96PQ7 755 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 ELAC1Q9H777 363 aaKnown RBP11.2□□□□□ -0.62
CHFR-220ENST00000541817 KAT14Q9H8E8 782 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 WDR6Q9NNW5 1121 aaKnown RBP11.2□□□□□ -0.62
CHFR-220ENST00000541817 DAXXQ9UER7 740 aaPredicted RBP11.2□□□□□ -0.62
CHFR-220ENST00000541817 RAB23Q9ULC3 237 aa11.2□□□□□ -0.62
CHFR-220ENST00000541817 CLUHO75153 1309 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 NEDD4P46934 1319 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 SRRM3A6NNA2 597 aaPredicted RBP11.19□□□□□ -0.62
CHFR-220ENST00000541817 CYSRT1A8MQ03 144 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 GPR182O15218 404 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 ZC3H11AO75152 810 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHFR-220ENST00000541817 RFPL2O75678 378 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 TOP3BO95985 862 aaKnown RBP11.19□□□□□ -0.62
CHFR-220ENST00000541817 IGHDP01880 384 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 CNPP09543 421 aaKnown RBP11.19□□□□□ -0.62
CHFR-220ENST00000541817 SPATA31D3P0C874 917 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 KLRC1P26715 233 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 ALDH7A1P49419 539 aaKnown RBP11.19□□□□□ -0.62
CHFR-220ENST00000541817 SRSF5Q13243 272 aaKnown RBP11.19□□□□□ -0.62
CHFR-220ENST00000541817 HTR4Q13639 388 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 CCDC6Q16204 474 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 MFSD6Q6ZSS7 791 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 SPATA31D4Q6ZUB0 917 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 ECHDC2Q86YB7 292 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 PIBF1Q8WXW3 757 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 ZNF668Q96K58 619 aaPredicted RBP11.19□□□□□ -0.62
CHFR-220ENST00000541817 SENP7Q9BQF6 1050 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 VN1R3Q9BXE9 311 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 MAN1C1Q9NR34 630 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 SLC2A4RGQ9NR83 387 aa11.19□□□□□ -0.62
CHFR-220ENST00000541817 MAP3K20Q9NYL2 800 aaKnown RBP11.19□□□□□ -0.62
CHFR-220ENST00000541817 SMIM35A0A1B0GVV1 85 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 C2CD2LO14523 706 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 INPPL1O15357 1258 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 LAMP2P13473 410 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 KCNA2P16389 499 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 TARSP26639 723 aaKnown RBP11.18□□□□□ -0.62
CHFR-220ENST00000541817 MLF2Q15773 248 aaPredicted RBP11.18□□□□□ -0.62
CHFR-220ENST00000541817 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 SLC44A4Q53GD3 710 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 LAIR1Q6GTX8 287 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 C15orf39Q6ZRI6 1047 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 SKAP1Q86WV1 359 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 KIAA0319LQ8IZA0 1049 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 NME8Q8N427 588 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 SMG7Q92540 1137 aaKnown RBP11.18□□□□□ -0.62
CHFR-220ENST00000541817 BORCS6Q96GS4 357 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 SHDQ96IW2 340 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 PIGSQ96S52 555 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 MYL10Q9BUA6 226 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 RXFP3Q9NSD7 469 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 BAZ2BQ9UIF8 2168 aaKnown RBP11.18□□□□□ -0.62
CHFR-220ENST00000541817 DOCK6Q96HP0 2047 aa11.18□□□□□ -0.62
CHFR-220ENST00000541817 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 ANHXE9PGG2 379 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 ZBTB5O15062 677 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 HOXA2O43364 376 aa11.17□□□□□ -0.62
CHFR-220ENST00000541817 VTNP04004 478 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms