RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 SARSP49591 514 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 KRT76Q01546 638 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 UBE3AQ05086 875 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 MTMR1Q13613 665 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 FAM102BQ5T8I3 360 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 ANKRD54Q6NXT1 300 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 KRT25Q7Z3Z0 450 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 COLGALT1Q8NBJ5 622 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 RASGRP4Q8TDF6 673 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 ATP8B4Q8TF62 1192 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 TNPO1Q92973 898 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 TNFRSF25Q93038 417 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 GPRASP2Q96D09 838 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 CDHR1Q96JP9 859 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 PGBD1Q96JS3 809 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 CDCA3Q99618 268 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 TMX1Q9H3N1 280 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 MFSD1Q9H3U5 465 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 GJB4Q9NTQ9 266 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 TYW1Q9NV66 732 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 CDH22Q9UJ99 828 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 NR2E1Q9Y466 385 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 UBIAD1Q9Y5Z9 338 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 SQORQ9Y6N5 450 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 IGSF9BQ9UPX0 1349 aa9.82□□□□□ -0.84
CLSTN3-212ENST00000541770 MYO10Q9HD67 2058 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 FSD2A1L4K1 749 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 PRR23AA6NEV1 266 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 MAFGO15525 162 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 RPS6KA5O75582 802 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 CIITAP33076 1130 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 USP11P51784 963 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 MTMR3Q13615 1198 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 PLCB4Q15147 1175 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 NONOQ15233 471 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 SAFBQ15424 915 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 SYCE2Q6PIF2 218 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 NIPA1Q7RTP0 329 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 DIS3L2Q8IYB7 885 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 CRIPAKQ8N1N5 446 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 TMEM105Q8N8V8 129 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 OXER1Q8TDS5 423 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 ADAM2Q99965 735 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 TCF25Q9BQ70 676 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 FOXP1Q9H334 677 aaPredicted RBP9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 SMOC2Q9H3U7 446 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 PUF60Q9UHX1 559 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 SORCS3Q9UPU3 1222 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 PCDHA2Q9Y5H9 948 aa9.81□□□□□ -0.84
CLSTN3-212ENST00000541770 CCDC194A0A1B0GVG4 234 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 HIDE1A8MVS5 230 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 BTBD18B2RXH4 712 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 MGEA5O60502 916 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 BRD1O95696 1058 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 WEE2P0C1S8 567 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 FGFR1P11362 822 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 ITGB5P18084 799 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 LAG3P18627 525 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 PDCP20941 246 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 ID4P47928 161 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 STAT5BP51692 787 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 CEP55Q53EZ4 464 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 PDE12Q6L8Q7 609 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 CES5AQ6NT32 575 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 MTHFD1LQ6UB35 978 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 MOXD1Q6UVY6 613 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 TMC7Q7Z402 723 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 FRMD5Q7Z6J6 570 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 TBCKQ8TEA7 893 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 MRPS27Q92552 414 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 NKD2Q969F2 451 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 PCYT2Q99447 389 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 MXRA8Q9BRK3 442 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 S1PR5Q9H228 398 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 ATP6V0A4Q9HBG4 840 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 JPH1Q9HDC5 661 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 JADE2Q9NQC1 790 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 SLC9A2Q9UBY0 812 aa9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 NOC2LQ9Y3T9 749 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-212ENST00000541770 TRIOO75962 3097 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 USP34Q70CQ2 3546 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 IGLV3-22A0A075B6J6 115 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 CYP3A7-CYP3A51PA0A087WV96 503 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 SMIM35A0A1B0GVV1 85 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 C2CD4DB7Z1M9 353 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 PROB1E7EW31 1015 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 DDX39AO00148 427 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 MEIS1O00470 390 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 FSCN2O14926 492 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 EDIL3O43854 480 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 ASGR2P07307 311 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 CYP3A7P24462 503 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 U2AF2P26368 475 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 KLRC1P26715 233 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 PBX3P40426 434 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 NBL1P41271 181 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 NUBP1P53384 320 aa9.79□□□□□ -0.84
CLSTN3-212ENST00000541770 FOSBP53539 338 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms