RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 OCRLQ01968 901 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 SART3Q15020 963 aaKnown RBP6.15□□□□□ -1.42
RAP1B-224ENST00000541216 TERF2Q15554 542 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 TXNDC5Q8NBS9 432 aaKnown RBP6.15□□□□□ -1.42
RAP1B-224ENST00000541216 NUDT10Q8NFP7 164 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 USP7Q93009 1102 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 MBD6Q96DN6 1003 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 NUDT11Q96G61 164 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 TTC1Q99614 292 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 OR10A5Q9H207 317 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 MS4A5Q9H3V2 200 aa6.15□□□□□ -1.42
RAP1B-224ENST00000541216 SHROOM4Q9ULL8 1493 aa6.15□□□□□ -1.43
RAP1B-224ENST00000541216 GPR42O15529 346 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 DPTQ07507 201 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 STAT4Q14765 748 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 ATP13A4Q4VNC1 1196 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 CT47A1Q5JQC4 288 aaPredicted RBP6.14□□□□□ -1.43
RAP1B-224ENST00000541216 TRMT10BQ6PF06 316 aaKnown RBP6.14□□□□□ -1.43
RAP1B-224ENST00000541216 CXXC5Q7LFL8 322 aaKnown RBP6.14□□□□□ -1.43
RAP1B-224ENST00000541216 NME9Q86XW9 330 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 DNAJC10Q8IXB1 793 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 AMER2Q8N7J2 671 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 ZNF610Q8N9Z0 462 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 RTF1Q92541 710 aaKnown RBP6.14□□□□□ -1.43
RAP1B-224ENST00000541216 SLC5A5Q92911 643 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 ZNF496Q96IT1 587 aaPredicted RBP6.14□□□□□ -1.43
RAP1B-224ENST00000541216 SCYL1Q96KG9 808 aa6.14□□□□□ -1.43
RAP1B-224ENST00000541216 LCHNA4D1U4 455 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 BRINP1O60477 761 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 CNGA1P29973 690 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 RGS3P49796 1198 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 CD83Q01151 205 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 SLC6A3Q01959 620 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 ADCY1Q08828 1119 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 MOGSQ13724 837 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 MYBPC3Q14896 1274 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 BROXQ5VW32 411 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 DPP8Q6V1X1 898 aaPredicted RBP6.13□□□□□ -1.43
RAP1B-224ENST00000541216 KANSL1Q7Z3B3 1105 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 DDX42Q86XP3 938 aaKnown RBP eCLIP6.13□□□□□ -1.43
RAP1B-224ENST00000541216 ZZZ3Q8IYH5 903 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 E2F7Q96AV8 911 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 GPATCH3Q96I76 525 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 MAML3Q96JK9 1138 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 L2HGDHQ9H9P8 463 aa6.13□□□□□ -1.43
RAP1B-224ENST00000541216 APOBEC2Q9Y235 224 aaKnown RBP6.13□□□□□ -1.43
RAP1B-224ENST00000541216 UBA6A0AVT1 1052 aaPredicted RBP6.12□□□□□ -1.43
RAP1B-224ENST00000541216 H0Y858 1186 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 ELL2O00472 640 aaPredicted RBP6.12□□□□□ -1.43
RAP1B-224ENST00000541216 GPR39O43194 453 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 B4GALT3O60512 393 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 FOXE3Q13461 319 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 TOP3AQ13472 1001 aaPredicted RBP6.12□□□□□ -1.43
RAP1B-224ENST00000541216 DDB1Q16531 1140 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 TTC38Q5R3I4 469 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 SLFN12LQ6IEE8 588 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 Q6ZUG5 572 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 C11orf74Q86VG3 221 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 PASD1Q8IV76 773 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 BCL6BQ8N143 479 aaPredicted RBP6.12□□□□□ -1.43
RAP1B-224ENST00000541216 CLRN3Q8NCR9 226 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 KATNBL1Q9H079 304 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 IKZF4Q9H2S9 585 aa6.12□□□□□ -1.43
RAP1B-224ENST00000541216 PHLDB1Q86UU1 1377 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 ANKRD62A6NC57 917 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 LMO1P25800 156 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 CD40P25942 277 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 APEX1P27695 318 aaKnown RBP6.11□□□□□ -1.43
RAP1B-224ENST00000541216 LSP1P33241 339 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 ROM1Q03395 351 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 CALML6Q8TD86 181 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 AJUBAQ96IF1 538 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 MYL10Q9BUA6 226 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 ZDHHC5Q9C0B5 715 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 TMEM168Q9H0V1 697 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 POFUT1Q9H488 388 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 PCDH12Q9NPG4 1184 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 JADE2Q9NQC1 790 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 FTSJ1Q9UET6 329 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 ATP8A1Q9Y2Q0 1164 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 COL4A3BPQ9Y5P4 624 aa6.11□□□□□ -1.43
RAP1B-224ENST00000541216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.1□□□□□ -1.43
RAP1B-224ENST00000541216 PATE3B3GLJ2 98 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 ZNF623O75123 536 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 POLD1P28340 1107 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 ADCY8P40145 1251 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 CDKN1CP49918 316 aaPredicted RBP6.1□□□□□ -1.43
RAP1B-224ENST00000541216 NOLC1Q14978 699 aaKnown RBP eCLIP6.1□□□□□ -1.43
RAP1B-224ENST00000541216 EIF4HQ15056 248 aaKnown RBP6.1□□□□□ -1.43
RAP1B-224ENST00000541216 WDR72Q3MJ13 1102 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 MIIPQ5JXC2 388 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 TMEM200BQ69YZ2 307 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 UNQ6494/PRO21346Q6UXR6 183 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 RASSF3Q86WH2 238 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 PHYKPLQ8IUZ5 450 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 C7orf31Q8N865 590 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 TUBGCP5Q96RT8 1024 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 VTA1Q9NP79 307 aa6.1□□□□□ -1.43
RAP1B-224ENST00000541216 USP36Q9P275 1121 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms