RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 SH3TC2Q8TF17 1288 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 ARHGAP26Q9UNA1 814 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 PRR23D1E9PI22 279 aaPredicted RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 PRR23D2P0DMB1 279 aaPredicted RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 GUCA1AP43080 201 aaPredicted RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 ZNF827Q17R98 1081 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TRIML2Q8N7C3 387 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 CCDC197Q8NCU1 140 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 JRKLQ9Y4A0 524 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 NR5A1Q13285 461 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 ANKS6Q68DC2 871 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TESK2Q96S53 571 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TUBGCP2Q9BSJ2 902 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 ADA2Q9NZK5 511 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 LSM7Q9UK45 103 aaKnown RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TRIM33Q9UPN9 1127 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 DYNLL1P63167 89 aaKnown RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 NT5DC4Q86YG4 428 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 ARMC2Q8NEN0 867 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 GREM2Q9H772 168 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 HMBSP08397 361 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 ESRRAP11474 423 aaPredicted RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 PSMC5P62195 406 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TBL3Q12788 808 aaKnown RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 OOSP2Q86WS3 158 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 SERPINB13Q9UIV8 391 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 FAM47DPA6NHR8 397 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 FAM47E-STBD1D6RA91 191 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 SLC8A1P32418 973 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 C2orf54Q08AI8 447 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TRIM62Q9BVG3 475 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 SPATA16Q9BXB7 569 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 RAVER2Q9HCJ3 691 aaKnown RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 H2AFY2Q9P0M6 372 aaPredicted RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 ANGPTL2Q9UKU9 493 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 KDM5AP29375 1690 aaKnown RBP10.68□□□□□ -0.7
TRERF1-205ENST00000541110 TOP2BQ02880 1626 aa10.68□□□□□ -0.7
TRERF1-205ENST00000541110 DIAPH2O60879 1101 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 PYGBP11216 843 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 SIX5Q8N196 739 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 TTC17Q96AE7 1141 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 DTNAQ9Y4J8 743 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 RAPGEF6Q8TEU7 1601 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 ENC1O14682 589 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 ARHGEF7Q14155 803 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 IRAK1BP1Q5VVH5 260 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 THOC1Q96FV9 657 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 VPS11Q9H270 941 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 EPB41L5Q9HCM4 733 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 KIF1BO60333 1816 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 ZMYM3Q14202 1370 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 ATP10DQ9P241 1426 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 C2CD2LO14523 706 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 TLR2O60603 784 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 SEC24BO95487 1268 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 ZNF157P51786 506 aaPredicted RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 IFT88Q13099 833 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 ATXN7L3BQ96GX2 97 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 CTTNBP2Q8WZ74 1663 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 USP17L8P0C7I0 530 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 DARSP14868 501 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 TCP1P17987 556 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 HDLBPQ00341 1268 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 OCA2Q04671 838 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 DEPDC1Q5TB30 811 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 USP19O94966 1318 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 PIK3R2O00459 728 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 FAM160B2Q86V87 743 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 APOBEC3FQ8IUX4 373 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 AATKQ6ZMQ8 1374 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 KIAA0586Q9BVV6 1533 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 LDHAP00338 332 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 PDIA3P30101 505 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 ADD1P35611 737 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 CDC37Q16543 378 aaPredicted RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 GRAMD4Q6IC98 578 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 PIGOQ8TEQ8 1089 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
TRERF1-205ENST00000541110 SRPRBQ9Y5M8 271 aaKnown RBP10.67□□□□□ -0.7
TRERF1-205ENST00000541110 TOGARAM2Q6ZUX3 1019 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 ASNSD1Q9NWL6 643 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 LAD1O00515 517 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 TNPO2O14787 897 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 KRT4P19013 534 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 COPB2P35606 906 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 SLC16A1P53985 500 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 CSE1LP55060 971 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 HPCAP84074 193 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 EIF2B5Q13144 721 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 DDX42Q86XP3 938 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 CCNYL1Q8N7R7 359 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 GPR101Q96P66 508 aaPredicted RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 PIGSQ96S52 555 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 STN1Q9H668 368 aaKnown RBP10.66□□□□□ -0.7
TRERF1-205ENST00000541110 ENTPD7Q9NQZ7 604 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 TNNQ9UQP3 1299 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 UBE4BO95155 1302 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 PRXQ9BXM0 1461 aa10.66□□□□□ -0.7
TRERF1-205ENST00000541110 GADD45BO75293 160 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms