RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 ELL2O00472 640 aaPredicted RBP8.56□□□□□ -1.04
YBX3-210ENST00000540975 ZEB2O60315 1214 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 SOX5P35711 763 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 EFEMP1Q12805 493 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 STRN3Q13033 797 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 ATP13A4Q4VNC1 1196 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 BROXQ5VW32 411 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 BMP8AQ7Z5Y6 402 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 CIR1Q86X95 450 aaPredicted RBP8.56□□□□□ -1.04
YBX3-210ENST00000540975 OR5AN1Q8NGI8 311 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 LOXL4Q96JB6 756 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 GNRHR2Q96P88 292 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 TTC1Q99614 292 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 USP36Q9P275 1121 aaKnown RBP8.56□□□□□ -1.04
YBX3-210ENST00000540975 FAM184BQ9ULE4 1060 aa8.56□□□□□ -1.04
YBX3-210ENST00000540975 LCHNA4D1U4 455 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 MATN2O00339 956 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 NEMP1O14524 444 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 BUD31P41223 144 aaPredicted RBP8.55□□□□□ -1.04
YBX3-210ENST00000540975 ID4P47928 161 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 ADAM15Q13444 863 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 KLHDC10Q6PID8 442 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 ESPNLQ6ZVH7 1005 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 PRRT2Q7Z6L0 340 aaPredicted RBP8.55□□□□□ -1.04
YBX3-210ENST00000540975 TAX1BP1Q86VP1 789 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 DNERQ8NFT8 737 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 SLC5A5Q92911 643 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 PITHD1Q9GZP4 211 aaPredicted RBP8.55□□□□□ -1.04
YBX3-210ENST00000540975 MS4A5Q9H3V2 200 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 DENND2AQ9ULE3 1009 aa8.55□□□□□ -1.04
YBX3-210ENST00000540975 A0A0A6YYJ9 748 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 MAFGO15525 162 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 VIL1P09327 827 aaKnown RBP8.54□□□□□ -1.04
YBX3-210ENST00000540975 CR2P20023 1033 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 SESN2P58004 480 aaPredicted RBP8.54□□□□□ -1.04
YBX3-210ENST00000540975 HGFACQ04756 655 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 DDB1Q16531 1140 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 SPATS1Q496A3 300 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 FRMD7Q6ZUT3 714 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 KRT26Q7Z3Y9 468 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 RASSF3Q86WH2 238 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 CFHR4Q92496 578 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 NKD2Q969F2 451 aaPredicted RBP8.54□□□□□ -1.04
YBX3-210ENST00000540975 DYDC2Q96IM9 177 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 HAPLN2Q9GZV7 340 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 MTG2Q9H4K7 406 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 SMPD4Q9NXE4 827 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 PRKAB1Q9Y478 270 aa8.54□□□□□ -1.04
YBX3-210ENST00000540975 CTDP1Q9Y5B0 961 aaPredicted RBP8.54□□□□□ -1.04
YBX3-210ENST00000540975 H2AFYO75367 372 aaKnown RBP8.53□□□□□ -1.04
YBX3-210ENST00000540975 MAGEA10P43363 369 aaPredicted RBP8.53□□□□□ -1.04
YBX3-210ENST00000540975 CT47A1Q5JQC4 288 aaPredicted RBP8.53□□□□□ -1.04
YBX3-210ENST00000540975 TCTN3Q6NUS6 607 aa8.53□□□□□ -1.04
YBX3-210ENST00000540975 OR14K1Q8NGZ2 314 aa8.53□□□□□ -1.04
YBX3-210ENST00000540975 GFM2Q969S9 779 aaKnown RBP8.53□□□□□ -1.04
YBX3-210ENST00000540975 C12orf65Q9H3J6 166 aaKnown RBP8.53□□□□□ -1.04
YBX3-210ENST00000540975 PUF60Q9UHX1 559 aaKnown RBP8.53□□□□□ -1.04
YBX3-210ENST00000540975 SYNPO2Q9UMS6 1093 aa8.53□□□□□ -1.04
YBX3-210ENST00000540975 OAZ3Q9UMX2 235 aa8.53□□□□□ -1.04
YBX3-210ENST00000540975 MYPNQ86TC9 1320 aa8.53□□□□□ -1.04
YBX3-210ENST00000540975 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.52□□□□□ -1.05
YBX3-210ENST00000540975 C2orf78A6NCI8 922 aa8.52□□□□□ -1.05
YBX3-210ENST00000540975 PATE3B3GLJ2 98 aa8.52□□□□□ -1.05
YBX3-210ENST00000540975 RAB11FIP3O75154 756 aa8.52□□□□□ -1.05
YBX3-210ENST00000540975 ICAM4Q14773 271 aa8.52□□□□□ -1.05
YBX3-210ENST00000540975 AFAP1L2Q8N4X5 818 aa8.52□□□□□ -1.05
YBX3-210ENST00000540975 TTC9BQ8N6N2 239 aa8.52□□□□□ -1.05
YBX3-210ENST00000540975 GIMAP8Q8ND71 665 aaPredicted RBP8.52□□□□□ -1.05
YBX3-210ENST00000540975 DPYSL5Q9BPU6 564 aa8.52□□□□□ -1.05
YBX3-210ENST00000540975 ST6GALNAC2Q9UJ37 374 aa8.52□□□□□ -1.05
YBX3-210ENST00000540975 NOC2LQ9Y3T9 749 aaKnown RBP8.52□□□□□ -1.05
YBX3-210ENST00000540975 SBNO2Q9Y2G9 1366 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 FOXS1O43638 330 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 CDC14BO60729 498 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 OPHN1O60890 802 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 ZBTB41Q5SVQ8 909 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 CHST13Q8NET6 341 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 LPPQ93052 612 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 WDR92Q96MX6 357 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 C8orf49Q96NF6 230 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 NOL10Q9BSC4 688 aaKnown RBP8.51□□□□□ -1.05
YBX3-210ENST00000540975 ANO3Q9BYT9 981 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 TMX1Q9H3N1 280 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 CD248Q9HCU0 757 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 DNAI1Q9UI46 699 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 KCNG1Q9UIX4 513 aa8.51□□□□□ -1.05
YBX3-210ENST00000540975 PRSS38A1L453 326 aa8.5□□□□□ -1.05
YBX3-210ENST00000540975 BRINP1O60477 761 aa8.5□□□□□ -1.05
YBX3-210ENST00000540975 ZNF623O75123 536 aa8.5□□□□□ -1.05
YBX3-210ENST00000540975 PCDH8O95206 1070 aa8.5□□□□□ -1.05
YBX3-210ENST00000540975 EYA4O95677 639 aa8.5□□□□□ -1.05
YBX3-210ENST00000540975 ADCY7P51828 1080 aa8.5□□□□□ -1.05
YBX3-210ENST00000540975 ATP2C1P98194 919 aaPredicted RBP8.5□□□□□ -1.05
YBX3-210ENST00000540975 Q8TCH9 128 aa8.5□□□□□ -1.05
YBX3-210ENST00000540975 POLR3BQ9NW08 1133 aaPredicted RBP8.5□□□□□ -1.05
YBX3-210ENST00000540975 ZFR2Q9UPR6 939 aaKnown RBP8.5□□□□□ -1.05
YBX3-210ENST00000540975 A0A0A6YYK5 440 aaPredicted RBP8.49□□□□□ -1.05
YBX3-210ENST00000540975 PMS2P1A4D2B8 440 aa8.49□□□□□ -1.05
YBX3-210ENST00000540975 ULK1O75385 1050 aa8.49□□□□□ -1.05
YBX3-210ENST00000540975 ACAP1Q15027 740 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms