RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PRPHP41219 470 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 EMC2Q15006 297 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 ECM1Q16610 540 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 POTEGQ6S5H5 508 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 FERMT3Q86UX7 667 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 KSR1Q8IVT5 923 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 SP7Q8TDD2 431 aaPredicted RBP18.86■□□□□ 0.61
CD9-209ENST00000540891 TMEM143Q96AN5 459 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 PRDM12Q9H4Q4 367 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 INSL6Q9Y581 213 aa18.86■□□□□ 0.61
CD9-209ENST00000540891 CHD7Q9P2D1 2997 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 A0A087WZ62 844 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 LINC01553A4QN01 128 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 XRCC6P12956 609 aaKnown RBP eCLIP18.85■□□□□ 0.61
CD9-209ENST00000540891 DNM2P50570 870 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 PDIA5Q14554 519 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 DSC3Q14574 896 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 RHPN2Q8IUC4 686 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 ERMNQ8TAM6 284 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 NLRP7Q8WX94 980 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 FDXACB1Q9BRP7 624 aaPredicted RBP18.85■□□□□ 0.61
CD9-209ENST00000540891 CERS4Q9HA82 394 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 RC3H2Q9HBD1 1191 aaKnown RBP18.85■□□□□ 0.61
CD9-209ENST00000540891 COL4A6Q14031 1691 aa18.85■□□□□ 0.61
CD9-209ENST00000540891 EPOPA6NHQ4 379 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 PP2D1A8MPX8 630 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 CSDE1O75534 798 aaKnown RBP18.84■□□□□ 0.61
CD9-209ENST00000540891 FGFR4P22455 802 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 RESTQ13127 1097 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 ODR4Q5SWX8 454 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 BRAPQ7Z569 592 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 ZNF410Q86VK4 478 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 HSCBQ8IWL3 235 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 EXOC8Q8IYI6 725 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 PRPF31Q8WWY3 499 aaKnown RBP18.84■□□□□ 0.61
CD9-209ENST00000540891 MTRQ99707 1265 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 RGS18Q9NS28 235 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 LRWD1Q9UFC0 647 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 COL4A3BPQ9Y5P4 624 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 TTC3P53804 2025 aa18.84■□□□□ 0.61
CD9-209ENST00000540891 GAS2O43903 313 aaKnown RBP18.83■□□□□ 0.6
CD9-209ENST00000540891 DGAT1O75907 488 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 CDC42EP1Q00587 391 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 DTHD1Q6ZMT9 781 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 FAM43BQ6ZT52 329 aaPredicted RBP18.83■□□□□ 0.6
CD9-209ENST00000540891 PSPC1Q8WXF1 523 aaKnown RBP18.83■□□□□ 0.6
CD9-209ENST00000540891 NLRP4Q96MN2 994 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 SCLT1Q96NL6 688 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 NACC1Q96RE7 527 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 YME1L1Q96TA2 773 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 ADAM2Q99965 735 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 MMTAG2Q9BU76 263 aaKnown RBP18.83■□□□□ 0.6
CD9-209ENST00000540891 GCOM2Q9BZD3 368 aaPredicted RBP18.83■□□□□ 0.6
CD9-209ENST00000540891 IFT122Q9HBG6 1241 aa18.83■□□□□ 0.6
CD9-209ENST00000540891 DBR1Q9UK59 544 aaKnown RBP18.83■□□□□ 0.6
CD9-209ENST00000540891 C9IYK1 514 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 RFXAPO00287 272 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 MUTP22033 750 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 CDC25AP30304 524 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 CCT6AP40227 531 aaKnown RBP18.82■□□□□ 0.6
CD9-209ENST00000540891 LAMTOR4Q0VGL1 99 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 NPAS4Q8IUM7 802 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 SNX29Q8TEQ0 813 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 ZNF689Q96CS4 500 aaPredicted RBP18.82■□□□□ 0.6
CD9-209ENST00000540891 RAB34Q9BZG1 259 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 ATP6V0A4Q9HBG4 840 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 COL6A3P12111 3177 aa18.82■□□□□ 0.6
CD9-209ENST00000540891 DENND3A2RUS2 1198 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 USO1O60763 962 aaKnown RBP18.81■□□□□ 0.6
CD9-209ENST00000540891 DGKIO75912 1065 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 LINC00271P0C7V0 271 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 FOSL2P15408 326 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 ARL2P36404 184 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 SARSP49591 514 aaKnown RBP18.81■□□□□ 0.6
CD9-209ENST00000540891 ERVK-21P61565 698 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 ARL6IP4Q66PJ3 421 aaKnown RBP18.81■□□□□ 0.6
CD9-209ENST00000540891 FAM173BQ6P4H8 233 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 ASAP3Q8TDY4 903 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 TCP11Q8WWU5 503 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 ARNTL2Q8WYA1 636 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 C1orf112Q9NSG2 853 aa18.81■□□□□ 0.6
CD9-209ENST00000540891 VWA3AA6NCI4 1184 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 STX6O43752 255 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 FAM189BP81408 668 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 SF3A1Q15459 793 aaKnown RBP18.8■□□□□ 0.6
CD9-209ENST00000540891 SLC24A5Q71RS6 500 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 CCDC43Q96MW1 224 aaKnown RBP18.8■□□□□ 0.6
CD9-209ENST00000540891 TGS1Q96RS0 853 aaKnown RBP18.8■□□□□ 0.6
CD9-209ENST00000540891 C17orf80Q9BSJ5 609 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 MINDY3Q9H8M7 445 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 GPRC5CQ9NQ84 441 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 DDX19AQ9NUU7 478 aaKnown RBP18.8■□□□□ 0.6
CD9-209ENST00000540891 KIAA1024Q9UPX6 916 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 STK24Q9Y6E0 443 aa18.8■□□□□ 0.6
CD9-209ENST00000540891 ADGRA3Q8IWK6 1321 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 ASAP2O43150 1006 aa18.79■□□□□ 0.6
CD9-209ENST00000540891 LPXNO60711 386 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms