RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 SKIV2LQ15477 1246 aaKnown RBP23.65■■□□□ 1.38
PTMS-205ENST00000540828 FAM184AQ8NB25 1140 aa23.65■■□□□ 1.38
PTMS-205ENST00000540828 MRPL38Q96DV4 380 aaKnown RBP23.65■■□□□ 1.38
PTMS-205ENST00000540828 DYDC2Q96IM9 177 aa23.65■■□□□ 1.38
PTMS-205ENST00000540828 ZNF668Q96K58 619 aaPredicted RBP23.65■■□□□ 1.38
PTMS-205ENST00000540828 LXNQ9BS40 222 aa23.65■■□□□ 1.38
PTMS-205ENST00000540828 ZSWIM4Q9H7M6 989 aa23.65■■□□□ 1.38
PTMS-205ENST00000540828 TTC12Q9H892 705 aaPredicted RBP23.65■■□□□ 1.38
PTMS-205ENST00000540828 UPF2Q9HAU5 1272 aaKnown RBP23.65■■□□□ 1.38
PTMS-205ENST00000540828 SUCLA2Q9P2R7 463 aaPredicted RBP23.65■■□□□ 1.38
PTMS-205ENST00000540828 NEMFO60524 1076 aa23.64■■□□□ 1.37
PTMS-205ENST00000540828 PTPROQ16827 1216 aa23.64■■□□□ 1.37
PTMS-205ENST00000540828 EXOC8Q8IYI6 725 aa23.64■■□□□ 1.37
PTMS-205ENST00000540828 ZNF579Q8NAF0 562 aaKnown RBP23.64■■□□□ 1.37
PTMS-205ENST00000540828 NLRP7Q8WX94 980 aa23.64■■□□□ 1.37
PTMS-205ENST00000540828 SYMPKQ92797 1274 aaKnown RBP23.64■■□□□ 1.37
PTMS-205ENST00000540828 CEP170P1Q96L14 293 aa23.64■■□□□ 1.37
PTMS-205ENST00000540828 HSD17B14Q9BPX1 270 aa23.64■■□□□ 1.37
PTMS-205ENST00000540828 COG5Q9UP83 839 aa23.64■■□□□ 1.37
PTMS-205ENST00000540828 REV3LO60673 3130 aa23.64■■□□□ 1.37
PTMS-205ENST00000540828 ST18O60284 1047 aa23.63■■□□□ 1.37
PTMS-205ENST00000540828 ATP2B1P20020 1258 aa23.63■■□□□ 1.37
PTMS-205ENST00000540828 CTNNB1P35222 781 aa23.63■■□□□ 1.37
PTMS-205ENST00000540828 TXKP42681 527 aa23.63■■□□□ 1.37
PTMS-205ENST00000540828 CTTNQ14247 550 aaKnown RBP23.63■■□□□ 1.37
PTMS-205ENST00000540828 OTUD6AQ7L8S5 288 aa23.63■■□□□ 1.37
PTMS-205ENST00000540828 EIF2AK1Q9BQI3 630 aaKnown RBP23.63■■□□□ 1.37
PTMS-205ENST00000540828 GCOM2Q9BZD3 368 aaPredicted RBP23.63■■□□□ 1.37
PTMS-205ENST00000540828 TMEM60Q9H2L4 133 aa23.63■■□□□ 1.37
PTMS-205ENST00000540828 DHX33Q9H6R0 707 aaKnown RBP23.63■■□□□ 1.37
PTMS-205ENST00000540828 ELAC1Q9H777 363 aaKnown RBP23.63■■□□□ 1.37
PTMS-205ENST00000540828 MRPL42Q9Y6G3 142 aaKnown RBP23.63■■□□□ 1.37
PTMS-205ENST00000540828 LYPLA2O95372 231 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 YWHABP31946 246 aaKnown RBP23.62■■□□□ 1.37
PTMS-205ENST00000540828 RFC5P40937 340 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 GATMP50440 423 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 ZNF410Q86VK4 478 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 TPH2Q8IWU9 490 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 SCLT1Q96NL6 688 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 PLVAPQ9BX97 442 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 TMEM161AQ9NX61 479 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 RALGAPA2Q2PPJ7 1873 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 NLRC5Q86WI3 1866 aa23.62■■□□□ 1.37
PTMS-205ENST00000540828 A0A087WZ62 844 aa23.61■■□□□ 1.37
PTMS-205ENST00000540828 ZBTB39O15060 712 aa23.61■■□□□ 1.37
PTMS-205ENST00000540828 ZSCAN20P17040 1043 aaPredicted RBP23.61■■□□□ 1.37
PTMS-205ENST00000540828 MCM7P33993 719 aa23.61■■□□□ 1.37
PTMS-205ENST00000540828 CYP4A11Q02928 519 aa23.61■■□□□ 1.37
PTMS-205ENST00000540828 NEK9Q8TD19 979 aa23.61■■□□□ 1.37
PTMS-205ENST00000540828 SLC7A3Q8WY07 619 aa23.61■■□□□ 1.37
PTMS-205ENST00000540828 HLA-CQ95604 372 aa23.61■■□□□ 1.37
PTMS-205ENST00000540828 FDXACB1Q9BRP7 624 aaPredicted RBP23.61■■□□□ 1.37
PTMS-205ENST00000540828 C11orf84Q9BUA3 381 aaPredicted RBP23.61■■□□□ 1.37
PTMS-205ENST00000540828 ATP6V0A4Q9HBG4 840 aa23.61■■□□□ 1.37
PTMS-205ENST00000540828 IBSPP21815 317 aaPredicted RBP23.6■■□□□ 1.37
PTMS-205ENST00000540828 FGFR4P22455 802 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 TFF2Q03403 129 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 ORC2Q13416 577 aaPredicted RBP23.6■■□□□ 1.37
PTMS-205ENST00000540828 ZNF174Q15697 407 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 AAK1Q2M2I8 961 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 PAN2Q504Q3 1202 aaKnown RBP23.6■■□□□ 1.37
PTMS-205ENST00000540828 XKR9Q5GH70 373 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 FAM102BQ5T8I3 360 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 RHPN2Q8IUC4 686 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 INO80BQ9C086 356 aaPredicted RBP23.6■■□□□ 1.37
PTMS-205ENST00000540828 LMAN2LQ9H0V9 348 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 TTC28Q96AY4 2481 aa23.6■■□□□ 1.37
PTMS-205ENST00000540828 GRM6O15303 877 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 CSDE1O75534 798 aaKnown RBP23.59■■□□□ 1.37
PTMS-205ENST00000540828 POLGP54098 1239 aaPredicted RBP23.59■■□□□ 1.37
PTMS-205ENST00000540828 NAALADL2Q58DX5 795 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 NOSTRINQ8IVI9 506 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 KSR1Q8IVT5 923 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 P2RX5Q93086 422 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 TMX3Q96JJ7 454 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 TBC1D32Q96NH3 1257 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 CHST12Q9NRB3 414 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 ANKEF1Q9NU02 776 aa23.59■■□□□ 1.37
PTMS-205ENST00000540828 TBKBP1A7MCY6 615 aa23.58■■□□□ 1.37
PTMS-205ENST00000540828 BMP1P13497 986 aa23.58■■□□□ 1.37
PTMS-205ENST00000540828 U2AF2P26368 475 aaKnown RBP eCLIP23.58■■□□□ 1.37
PTMS-205ENST00000540828 TRAPPC10P48553 1259 aa23.58■■□□□ 1.37
PTMS-205ENST00000540828 ECHDC2Q86YB7 292 aa23.58■■□□□ 1.37
PTMS-205ENST00000540828 PRPF31Q8WWY3 499 aaKnown RBP23.58■■□□□ 1.37
PTMS-205ENST00000540828 TMEM143Q96AN5 459 aa23.58■■□□□ 1.37
PTMS-205ENST00000540828 PLAGL2Q9UPG8 496 aa23.58■■□□□ 1.37
PTMS-205ENST00000540828 COL4A3BPQ9Y5P4 624 aa23.58■■□□□ 1.37
PTMS-205ENST00000540828 MYO7AQ13402 2215 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 A0A0U1RQF3 1178 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 GAS2O43903 313 aaKnown RBP23.57■■□□□ 1.36
PTMS-205ENST00000540828 CD2BP2O95400 341 aaKnown RBP23.57■■□□□ 1.36
PTMS-205ENST00000540828 XRCC6P12956 609 aaKnown RBP eCLIP23.57■■□□□ 1.362e-9■□□□□ 10.4
PTMS-205ENST00000540828 MCM2P49736 904 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 GNL2Q13823 731 aaKnown RBP23.57■■□□□ 1.36
PTMS-205ENST00000540828 TIGD5Q53EQ6 642 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 TTC38Q5R3I4 469 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 TCP11Q8WWU5 503 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 PSPC1Q8WXF1 523 aaKnown RBP23.57■■□□□ 1.36
PTMS-205ENST00000540828 NLRP4Q96MN2 994 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 IFT122Q9HBG6 1241 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms