RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 C1orf186Q6ZWK4 172 aa18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 WNK4Q96J92 1243 aa18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 TUFT1Q9NNX1 390 aa18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 HACL1Q9UJ83 578 aa18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 EMSYQ7Z589 1322 aa18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 GGCXP38435 758 aa18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 FKBP1AP62942 108 aaKnown RBP18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 ZSWIM2Q8NEG5 633 aa18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 RBM46Q8TBY0 533 aaKnown RBP18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 CEP170P1Q96L14 293 aa18.6■□□□□ 0.57
EPB41L3-204ENST00000540638 FMO5P49326 533 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 DLG4P78352 724 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 ZNF211Q13398 564 aaPredicted RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 ZNF720Q7Z2F6 126 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 CTTNBP2NLQ9P2B4 639 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 ANKRD65E5RJM6 399 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 KRT5P13647 590 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 FAM212AQ96EL1 285 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 ZNF668Q96K58 619 aaPredicted RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 POP1Q99575 1024 aaKnown RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 RANBP17Q9H2T7 1088 aaKnown RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 TRAF3IP3Q9Y228 551 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 P4HBP07237 508 aaKnown RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 YWHABP31946 246 aaKnown RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 COPB2P35606 906 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 SSR1P43307 286 aaKnown RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 QARSP47897 775 aaKnown RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 TUBB4BP68371 445 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 TKFCQ3LXA3 575 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 COBLL1Q53SF7 1204 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 CYFIP1Q7L576 1253 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 MCF2L2Q86YR7 1114 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 RPGRIP1Q96KN7 1286 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 DDX47Q9H0S4 455 aaKnown RBP18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 DPH5Q9H2P9 285 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 OSGEPQ9NPF4 335 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 NAGPAQ9UK23 515 aa18.59■□□□□ 0.57
EPB41L3-204ENST00000540638 ICAM1P05362 532 aa18.58■□□□□ 0.57
EPB41L3-204ENST00000540638 VCAM1P19320 739 aa18.58■□□□□ 0.57
EPB41L3-204ENST00000540638 SSTR3P32745 418 aaPredicted RBP18.58■□□□□ 0.57
EPB41L3-204ENST00000540638 CDK17Q00537 523 aa18.58■□□□□ 0.57
EPB41L3-204ENST00000540638 HAUS6Q7Z4H7 955 aa18.58■□□□□ 0.57
EPB41L3-204ENST00000540638 CAMKK2Q96RR4 588 aa18.58■□□□□ 0.57
EPB41L3-204ENST00000540638 GANQ9H2C0 597 aa18.58■□□□□ 0.57
EPB41L3-204ENST00000540638 SEPT9Q9UHD8 586 aaPredicted RBP18.58■□□□□ 0.57
EPB41L3-204ENST00000540638 CNTNAP1P78357 1384 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 ZBTB22O15209 634 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 ATP8B1O43520 1251 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 ANGEL2Q5VTE6 544 aaKnown RBP18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 SLC5A5Q92911 643 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 PRDM4Q9UKN5 801 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 RIPK3Q9Y572 518 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 STK24Q9Y6E0 443 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 MTERF2Q49AM1 385 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 SYTL5Q8TDW5 730 aaPredicted RBP18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 CEP89Q96ST8 783 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 PAGR1Q9BTK6 254 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 FAM107BQ9H098 131 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 INTS2Q9H0H0 1204 aaKnown RBP18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 GABBR1Q9UBS5 961 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 RAB21Q9UL25 225 aa18.58■□□□□ 0.56
EPB41L3-204ENST00000540638 GJC1P36383 396 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 SETQ01105 290 aaPredicted RBP18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 ITGB3BPQ13352 177 aaPredicted RBP18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 TRADDQ15628 312 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 TMEM132AQ24JP5 1023 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 SWSAP1Q6NVH7 229 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 SEPT14Q6ZU15 432 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 DDX42Q86XP3 938 aaKnown RBP eCLIP18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 MBOAT7Q96N66 472 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 KRIT1O00522 736 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 ATMINO43313 823 aaPredicted RBP18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 CALCAP01258 141 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 HNRNPH3P31942 346 aaKnown RBP18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 CARSP49589 748 aaKnown RBP18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 ATP1A2P50993 1020 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 GALCP54803 685 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 NAB2Q15742 525 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 UGCGQ16739 394 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 CRYGNQ8WXF5 182 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 POMGNT1Q8WZA1 660 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 STIM2Q9P246 746 aa18.57■□□□□ 0.56
EPB41L3-204ENST00000540638 CCNI2Q6ZMN8 369 aaPredicted RBP18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 KAT5Q92993 513 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 RSPH14Q9UHP6 348 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 GRID2IPA4D2P6 1211 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 HNRNPDLO14979 420 aaKnown RBP18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 HSF2BPO75031 334 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 CYP3A4P08684 503 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 PIK3CDO00329 1044 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 SMTNP53814 917 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 IFI16Q16666 785 aaKnown RBP18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 EPC2Q52LR7 807 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 EDEM3Q9BZQ6 932 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 ATRNL1Q5VV63 1379 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 CDK5RAP2Q96SN8 1893 aa18.56■□□□□ 0.56
EPB41L3-204ENST00000540638 FOXN3O00409 490 aaPredicted RBP18.55■□□□□ 0.56
EPB41L3-204ENST00000540638 ZEB2O60315 1214 aa18.55■□□□□ 0.56
EPB41L3-204ENST00000540638 TUBBP07437 444 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms