RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 BHMT2Q9H2M3 363 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 PABPC3Q9H361 631 aaKnown RBP13.99□□□□□ -0.17
DNMT1-203ENST00000540357 REXO2Q9Y3B8 237 aaKnown RBP13.99□□□□□ -0.17
DNMT1-203ENST00000540357 DDX39AO00148 427 aaKnown RBP13.99□□□□□ -0.17
DNMT1-203ENST00000540357 HNRNPCL1O60812 293 aaKnown RBP13.99□□□□□ -0.17
DNMT1-203ENST00000540357 ATF7P17544 494 aaPredicted RBP13.99□□□□□ -0.17
DNMT1-203ENST00000540357 FGFR4P22455 802 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 CA4P22748 312 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 PREPLQ4J6C6 727 aaPredicted RBP13.99□□□□□ -0.17
DNMT1-203ENST00000540357 SRRM1Q8IYB3 904 aaKnown RBP13.99□□□□□ -0.17
DNMT1-203ENST00000540357 ZNF34Q8IZ26 560 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 AGGF1Q8N302 714 aaeCLIP13.99□□□□□ -0.174e-6■■■■■ 27.3
DNMT1-203ENST00000540357 MTMR8Q96EF0 704 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 FAM84BQ96KN1 310 aaPredicted RBP13.99□□□□□ -0.17
DNMT1-203ENST00000540357 TTC25Q96NG3 672 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 OSBPL1AQ9BXW6 950 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 CPVLQ9H3G5 476 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 BCAP29Q9UHQ4 241 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 FGFR2P21802 821 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 RAD23BP54727 409 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 NPEPPSP55786 919 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 SLC8A3P57103 927 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 SATB1Q01826 763 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 TRAPPC3LQ5T215 181 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 FAM167BQ9BTA0 163 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 KCNG1Q9UIX4 513 aa13.99□□□□□ -0.17
DNMT1-203ENST00000540357 A0A087X0T9 212 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 FAM153BP0C7A2 387 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 TMEM253P0C7T8 217 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 FAM228BP0C875 321 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 POLR2MP0CAP2 368 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 POLE2P56282 527 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 TRIP13Q15645 432 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-203ENST00000540357 FAM153CQ494X1 144 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 FAM47EQ6ZV65 393 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 SYDE1Q6ZW31 735 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-203ENST00000540357 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 NSMCE1Q8WV22 266 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 INTS2Q9H0H0 1204 aaKnown RBP13.98□□□□□ -0.17
DNMT1-203ENST00000540357 Q9H521 79 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 FAM153AQ9UHL3 310 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 SLIT3O75094 1523 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 ZBTB5O15062 677 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 ASAP2O43150 1006 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 DNAJC8O75937 253 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-203ENST00000540357 ATP6V1G2O95670 118 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 ABL1P00519 1130 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 SMARCA1P28370 1054 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 KCTD1Q719H9 257 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 NEDD1Q8NHV4 660 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 FAM212AQ96EL1 285 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 STK33Q9BYT3 514 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 DHX36Q9H2U1 1008 aaKnown RBP13.98□□□□□ -0.17
DNMT1-203ENST00000540357 ZFP69BQ9UJL9 534 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 TXNDC9O14530 226 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 TRAPPC3O43617 180 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 SLC16A2P36021 539 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 COPS2P61201 443 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 DIXDC1Q155Q3 683 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 SH3GL2Q99962 352 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 WDR11Q9BZH6 1224 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 RIMBP3CA6NJZ7 1639 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 RIMBP3BA6NNM3 1639 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 RIMBP3Q9UFD9 1639 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 ARHGAP42A6NI28 874 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 PDHBP11177 359 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 MXI1P50539 228 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 APLFQ8IW19 511 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-203ENST00000540357 LRRC34Q8IZ02 419 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 RPUSD2Q8IZ73 545 aaKnown RBP13.98□□□□□ -0.17
DNMT1-203ENST00000540357 MDM1Q8TC05 714 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 NUDCD1Q96RS6 583 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 TCHPQ9BT92 498 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 CELF4Q9BZC1 486 aaKnown RBP13.98□□□□□ -0.17
DNMT1-203ENST00000540357 ATRNO75882 1429 aa13.98□□□□□ -0.17
DNMT1-203ENST00000540357 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 NQO1P15559 274 aaKnown RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 DYNC1I2Q13409 638 aaKnown RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 SPDYCQ5MJ68 293 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 CARD9Q9H257 536 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 MRPL47Q9HD33 250 aaKnown RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 ACTN1P12814 892 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 MSH2P43246 934 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 MIPOL1Q8TD10 442 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 CHD2O14647 1828 aaKnown RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 A0A0A6YYK5 440 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 FTLP02792 175 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 ESRRAP11474 423 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 PLS3P13797 630 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 FUKQ8N0W3 1084 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 CCDC24Q8N4L8 307 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 FAM20AQ96MK3 541 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 ESYT2A0FGR8 921 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 IGF2BP3O00425 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 ZNF844Q08AG5 666 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 GRB10Q13322 594 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 ITGB3BPQ13352 177 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 STAT4Q14765 748 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms