RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 FAM228AQ86W67 206 aa14.94□□□□□ -0.02
CCDC130-202ENST00000540216 CATSPER3Q86XQ3 398 aa14.94□□□□□ -0.02
CCDC130-202ENST00000540216 NLRP7Q8WX94 980 aa14.94□□□□□ -0.02
CCDC130-202ENST00000540216 PSPC1Q8WXF1 523 aaKnown RBP14.94□□□□□ -0.02
CCDC130-202ENST00000540216 NACC1Q96RE7 527 aa14.94□□□□□ -0.02
CCDC130-202ENST00000540216 CDX2Q99626 313 aaPredicted RBP14.94□□□□□ -0.02
CCDC130-202ENST00000540216 GCOM2Q9BZD3 368 aaPredicted RBP14.94□□□□□ -0.02
CCDC130-202ENST00000540216 C1orf112Q9NSG2 853 aa14.94□□□□□ -0.02
CCDC130-202ENST00000540216 DBR1Q9UK59 544 aaKnown RBP14.94□□□□□ -0.02
CCDC130-202ENST00000540216 ST3GAL5Q9UNP4 418 aa14.94□□□□□ -0.02
CCDC130-202ENST00000540216 HSP90AA1P07900 732 aaKnown RBP14.93□□□□□ -0.02
CCDC130-202ENST00000540216 TAP1Q03518 808 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 GRIN2CQ14957 1233 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 FAM117BQ6P1L5 589 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 RHPN2Q8IUC4 686 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 NPAS4Q8IUM7 802 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
CCDC130-202ENST00000540216 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
CCDC130-202ENST00000540216 LINC01599Q8WXQ3 324 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 YME1L1Q96TA2 773 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 MTRQ99707 1265 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 INO80BQ9C086 356 aaPredicted RBP14.93□□□□□ -0.02
CCDC130-202ENST00000540216 TMX1Q9H3N1 280 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 ATP6V0A4Q9HBG4 840 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 COL4A3BPQ9Y5P4 624 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 TTC3P53804 2025 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 SZT2Q5T011 3432 aa14.93□□□□□ -0.02
CCDC130-202ENST00000540216 DENND3A2RUS2 1198 aa14.92□□□□□ -0.02
CCDC130-202ENST00000540216 ZBTB39O15060 712 aa14.92□□□□□ -0.02
CCDC130-202ENST00000540216 ASAP2O43150 1006 aa14.92□□□□□ -0.02
CCDC130-202ENST00000540216 STAG3L1P0CL83 205 aa14.92□□□□□ -0.02
CCDC130-202ENST00000540216 SFPQP23246 707 aaKnown RBP eCLIP14.92□□□□□ -0.02
CCDC130-202ENST00000540216 CCT6AP40227 531 aaKnown RBP14.92□□□□□ -0.02
CCDC130-202ENST00000540216 MXD4Q14582 209 aaPredicted RBP14.92□□□□□ -0.02
CCDC130-202ENST00000540216 KRT79Q5XKE5 535 aa14.92□□□□□ -0.02
CCDC130-202ENST00000540216 POTEGQ6S5H5 508 aa14.92□□□□□ -0.02
CCDC130-202ENST00000540216 PIGOQ8TEQ8 1089 aa14.92□□□□□ -0.02
CCDC130-202ENST00000540216 PRPF31Q8WWY3 499 aaKnown RBP14.92□□□□□ -0.02
CCDC130-202ENST00000540216 A0A087WZ62 844 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 LCHNA4D1U4 455 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 STX6O43752 255 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 UPP2O95045 317 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 SARSP49591 514 aaKnown RBP14.91□□□□□ -0.02
CCDC130-202ENST00000540216 SLC24A5Q71RS6 500 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 RTN4RL1Q86UN2 441 aaPredicted RBP14.91□□□□□ -0.02
CCDC130-202ENST00000540216 FERMT3Q86UX7 667 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 CRIPAKQ8N1N5 446 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 KCTD17Q8N5Z5 321 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 MCPH1Q8NEM0 835 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 SNX29Q8TEQ0 813 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 TMEM143Q96AN5 459 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 NLRP4Q96MN2 994 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 GAS2L1Q99501 681 aaPredicted RBP14.91□□□□□ -0.02
CCDC130-202ENST00000540216 ADAM2Q99965 735 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 FDXACB1Q9BRP7 624 aaPredicted RBP14.91□□□□□ -0.02
CCDC130-202ENST00000540216 XPNPEP1Q9NQW7 623 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 RGS18Q9NS28 235 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 FOXD4L1Q9NU39 408 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 CHD9Q3L8U1 2897 aa14.91□□□□□ -0.02
CCDC130-202ENST00000540216 LINC01553A4QN01 128 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 ARHGEF35A5YM69 484 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 SLC26A4O43511 780 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 FOSL2P15408 326 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 ZSCAN20P17040 1043 aaPredicted RBP14.9□□□□□ -0.02
CCDC130-202ENST00000540216 LAMTOR4Q0VGL1 99 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 RESTQ13127 1097 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 TFDP1Q14186 410 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 DSC3Q14574 896 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 PCBP1Q15365 356 aaKnown RBP eCLIP14.9□□□□□ -0.02
CCDC130-202ENST00000540216 IL17AQ16552 155 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 SRGAP1Q7Z6B7 1085 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 MYLIPQ8WY64 445 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 ZNF668Q96K58 619 aaPredicted RBP14.9□□□□□ -0.02
CCDC130-202ENST00000540216 AK8Q96MA6 479 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 SAMD11Q96NU1 681 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 TGS1Q96RS0 853 aaKnown RBP14.9□□□□□ -0.02
CCDC130-202ENST00000540216 PRDM12Q9H4Q4 367 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 ZSCAN16Q9H4T2 348 aaPredicted RBP14.9□□□□□ -0.02
CCDC130-202ENST00000540216 RC3H2Q9HBD1 1191 aaKnown RBP14.9□□□□□ -0.02
CCDC130-202ENST00000540216 CHST12Q9NRB3 414 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 BMP2KQ9NSY1 1161 aaPredicted RBP14.9□□□□□ -0.02
CCDC130-202ENST00000540216 LRFN2Q9ULH4 789 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 MTMR6Q9Y217 621 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 ADGRA3Q8IWK6 1321 aa14.9□□□□□ -0.02
CCDC130-202ENST00000540216 VWA3AA6NCI4 1184 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 C9IYK1 514 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 RBAK-RBAKDNI3L0D1 243 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 MGEA5O60502 916 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 USO1O60763 962 aaKnown RBP14.89□□□□□ -0.03
CCDC130-202ENST00000540216 DGKIO75912 1065 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 ARHGEF15O94989 841 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 PHKA2P46019 1235 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 ERVK-21P61565 698 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 POU5F1BQ06416 359 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 ZNF689Q96CS4 500 aaPredicted RBP14.89□□□□□ -0.03
CCDC130-202ENST00000540216 NT5C3AQ9H0P0 336 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 ELAC1Q9H777 363 aaKnown RBP14.89□□□□□ -0.03
CCDC130-202ENST00000540216 IFT122Q9HBG6 1241 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 DACT1Q9NYF0 836 aa14.89□□□□□ -0.03
CCDC130-202ENST00000540216 PCDHB7Q9Y5E2 793 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms