RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 COG5Q9UP83 839 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 DAAM1Q9Y4D1 1078 aa15.11■□□□□ 0.01
SCNN1A-215ENST00000540037 ASTN1O14525 1302 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 RPTORQ8N122 1335 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 HGSO14964 777 aaPredicted RBP15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 RHBDL3P58872 404 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 GSTO1P78417 241 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 TLDC1Q6P9B6 456 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 FRMD5Q7Z6J6 570 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 BANK1Q8NDB2 785 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 CUL5Q93034 780 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 THAP2Q9H0W7 228 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 PNMA6FA0A0J9YX94 578 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 NR3C1P04150 777 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 SMARCA1P28370 1054 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 MMP13P45452 471 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 KCNJ2P63252 427 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 JAMLQ86YT9 394 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 ZDHHC14Q8IZN3 488 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 LMBR1Q8WVP7 490 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 PABPC3Q9H361 631 aaKnown RBP15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 MLXIPLQ9NP71 852 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 SWAP70Q9UH65 585 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 TRAF3IP3Q9Y228 551 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 KDM3AQ9Y4C1 1321 aa15.1■□□□□ 0.01
SCNN1A-215ENST00000540037 SNAP25P60880 206 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 MYO1EQ12965 1108 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 PLS1Q14651 629 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 RPAINQ86UA6 219 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 NEK9Q8TD19 979 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 MGARPQ8TDB4 240 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 CNOT10Q9H9A5 744 aaKnown RBP15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 INTS9Q9NV88 658 aaKnown RBP15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 SLC12A4Q9UP95 1085 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 CDK5RAP2Q96SN8 1893 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 CREB1P16220 341 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 PLCG2P16885 1265 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 COG2Q14746 738 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 DENND2CQ68D51 928 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 OTUD6AQ7L8S5 288 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 ARMC9Q7Z3E5 817 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 SYCE1Q8N0S2 351 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 CCDC63Q8NA47 563 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 SLC30A5Q8TAD4 765 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 PRCCQ92733 491 aaPredicted RBP15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 KRT35Q92764 455 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 ARFGEF1Q9Y6D6 1849 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 TMEM110-MUSTN1A8MSY1 372 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 A8MUI8 341 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 ANKRD63C9JTQ0 380 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 KIAA0391O15091 583 aaKnown RBP15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 RGS16O15492 202 aaPredicted RBP15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 GCNT3O95395 438 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 GCFC2P16383 781 aaKnown RBP15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 RPL21P46778 160 aaKnown RBP15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 PPATQ06203 517 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 PIGWQ7Z7B1 504 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 VPS36Q86VN1 386 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 CPNE8Q86YQ8 564 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 GRHL1Q9NZI5 618 aa15.09■□□□□ 0.01
SCNN1A-215ENST00000540037 LRRN2O75325 713 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 GHRP10912 638 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 GBP2P32456 591 aaPredicted RBP15.08■□□□□ 0
SCNN1A-215ENST00000540037 MRPL12P52815 198 aaKnown RBP15.08■□□□□ 0
SCNN1A-215ENST00000540037 ZNF543Q08ER8 600 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 DRAP1Q14919 205 aaPredicted RBP15.08■□□□□ 0
SCNN1A-215ENST00000540037 NAA25Q14CX7 972 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 ZC2HC1CQ53FD0 456 aaPredicted RBP15.08■□□□□ 0
SCNN1A-215ENST00000540037 PRR16Q569H4 304 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 KIAA1755Q5JYT7 1200 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 HOOK3Q86VS8 718 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 RUSC1Q9BVN2 902 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 RAB17Q9H0T7 212 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 GPR75-ASB3A0A0A6YYF3 556 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 A0A0A6YYK5 440 aaPredicted RBP15.08■□□□□ 0
SCNN1A-215ENST00000540037 TCRBV7S2A1N4TA0A589 114 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 SPATA31C1P0DKV0 1188 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 EIF3BP55884 814 aaKnown RBP15.08■□□□□ 0
SCNN1A-215ENST00000540037 ARHGAP44Q17R89 818 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 SHROOM1Q2M3G4 852 aaPredicted RBP15.08■□□□□ 0
SCNN1A-215ENST00000540037 ASPRV1Q53RT3 343 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 TTC27Q6P3X3 843 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 EPM2AIP1Q7L775 607 aaPredicted RBP15.08■□□□□ 0
SCNN1A-215ENST00000540037 CCDC50Q8IVM0 306 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 KIF2BQ8N4N8 673 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 ANKS4BQ8N8V4 417 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 PTPN22Q9Y2R2 807 aa15.08■□□□□ 0
SCNN1A-215ENST00000540037 UBOX5O94941 541 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 LDHCP07864 332 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 STAT1P42224 750 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 NOVP48745 357 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 TRPM8Q7Z2W7 1104 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 NSMCE1Q8WV22 266 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 RFFLQ8WZ73 363 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 CENPTQ96BT3 561 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 BHMT2Q9H2M3 363 aa15.07■□□□□ 0
SCNN1A-215ENST00000540037 ATP6V0A4Q9HBG4 840 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms