RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 DRP2Q13474 957 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 NFIXQ14938 502 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 DAGLBQ8NCG7 672 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 FAM118BQ9BPY3 351 aa13.99□□□□□ -0.17
MSH6-210ENST00000540021 NOP53Q9NZM5 478 aaKnown RBP13.99□□□□□ -0.17
MSH6-210ENST00000540021 FLT1P17948 1338 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 TRAPPC3O43617 180 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 GDF11O95390 407 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 POTEJP0CG39 1038 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 DLATP10515 647 aaKnown RBP13.98□□□□□ -0.17
MSH6-210ENST00000540021 PON1P27169 355 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 GCLMP48507 274 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 ZRSR2Q15696 482 aaKnown RBP13.98□□□□□ -0.17
MSH6-210ENST00000540021 HHATQ5VTY9 493 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 HGSNATQ68CP4 663 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 AADACL2Q6P093 401 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 TRPM8Q7Z2W7 1104 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 TRIM59Q8IWR1 403 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 RFFLQ8WZ73 363 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 STAMBPL1Q96FJ0 436 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 SERPINA10Q9UK55 444 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 SHBGP04278 402 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 PAX7P23759 505 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.174e-7■■■■■ 30.4
MSH6-210ENST00000540021 GRIK5Q16478 980 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 SWT1Q5T5J6 900 aaKnown RBP13.98□□□□□ -0.17
MSH6-210ENST00000540021 AGBL2Q5U5Z8 902 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 PPP4R3CPQ6ZMV5 832 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 CROCCP2Q86T23 111 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 NGLY1Q96IV0 654 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 ERP44Q9BS26 406 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 F8VZ95 297 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 PDHA1P08559 390 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 BRAFP15056 766 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 CYP11B2P19099 503 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 GBP1P32455 592 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 ERFP50548 548 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 TMC3Q7Z5M5 1100 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 FBXO11Q86XK2 927 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 THAP2Q9H0W7 228 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 SEMA4AQ9H3S1 761 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 ETNK1Q9HBU6 452 aa13.98□□□□□ -0.17
MSH6-210ENST00000540021 CNOT8Q9UFF9 292 aaKnown RBP13.98□□□□□ -0.17
MSH6-210ENST00000540021 ENO4A6NNW6 628 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 AKAP3O75969 853 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 PSMC6P62333 389 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 MXRA7P84157 204 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 TMEM132AQ24JP5 1023 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 ZNF384Q8TF68 577 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 MYH2Q9UKX2 1941 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 ZBTB5O15062 677 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 TOM1O60784 492 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 ATF2P15336 505 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 HNRNPH3P31942 346 aaKnown RBP13.97□□□□□ -0.17
MSH6-210ENST00000540021 QRICH1Q2TAL8 776 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 PPP1R9AQ9ULJ8 1098 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 PCDHGC5Q9Y5F6 944 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 DNM1LO00429 736 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 MED24O75448 989 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 SOX5P35711 763 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 CASP5P51878 434 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 LMNTD2Q8IXW0 634 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 RUNDC3BQ96NL0 473 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 SLIT3O75094 1523 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 C5P01031 1676 aa13.97□□□□□ -0.17
MSH6-210ENST00000540021 IGF2BP3O00425 579 aaKnown RBP eCLIP13.96□□□□□ -0.17
MSH6-210ENST00000540021 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 ECM1Q16610 540 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 TRAPPC3LQ5T215 181 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 GPATCH4Q5T3I0 446 aaKnown RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 BARGINQ6ZT62 677 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 SYN2Q92777 582 aaPredicted RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 CALR3Q96L12 384 aaKnown RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 TYW1Q9NV66 732 aaKnown RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 MYBL1P10243 752 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 HARSP12081 509 aaKnown RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 ATF7P17544 494 aaPredicted RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 SLMAPQ14BN4 828 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 MUM1Q2TAK8 710 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 RPUSD2Q8IZ73 545 aaKnown RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 BTBD6Q96KE9 485 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 PITPNM3Q9BZ71 974 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 PARVGQ9HBI0 331 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.96□□□□□ -0.17
MSH6-210ENST00000540021 ALG6Q9Y672 507 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 IKBKGQ9Y6K9 419 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 CLGNO14967 610 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 KCNA1Q09470 495 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 SF3B3Q15393 1217 aaKnown RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 FRMD5Q7Z6J6 570 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 ACTRT1Q8TDG2 376 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 TGS1Q96RS0 853 aaKnown RBP13.96□□□□□ -0.17
MSH6-210ENST00000540021 OSBPL7Q9BZF2 842 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 JMJD4Q9H9V9 463 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 CD209Q9NNX6 404 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 MTMR4Q9NYA4 1195 aa13.96□□□□□ -0.17
MSH6-210ENST00000540021 ZC3H4Q9UPT8 1303 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms