RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TRDNQ13061 729 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 GIT2Q14161 759 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 SEC23AQ15436 765 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 KLHL40Q2TBA0 621 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 MTERF4Q7Z6M4 381 aaKnown RBP6.79□□□□□ -1.32
CPSF7-219ENST00000539952 MRPL43Q8N983 215 aaKnown RBP6.79□□□□□ -1.32
CPSF7-219ENST00000539952 TMEM87AQ8NBN3 555 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 RILPL2Q969X0 211 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 ACSF2Q96CM8 615 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-219ENST00000539952 ADAM2Q99965 735 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 DSCC1Q9BVC3 393 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 APOL5Q9BWW9 433 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 FAM49AQ9H0Q0 323 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-219ENST00000539952 CWH43Q9H720 699 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 ENTPD7Q9NQZ7 604 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 CYP26B1Q9NR63 512 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 TMEM161AQ9NX61 479 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 SPG21Q9NZD8 308 aa6.79□□□□□ -1.32
CPSF7-219ENST00000539952 HIDE1A8MVS5 230 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 MEIS2O14770 477 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 CXCL14O95715 111 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 KCNA2P16389 499 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 ZSCAN20P17040 1043 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-219ENST00000539952 SDHBP21912 280 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 SP100P23497 879 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-219ENST00000539952 MSNP26038 577 aaKnown RBP6.78□□□□□ -1.32
CPSF7-219ENST00000539952 KLRC1P26715 233 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 GATMP50440 423 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 STAT5BP51692 787 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 TMEM62Q0P6H9 643 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 TDGQ13569 410 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 SMC1AQ14683 1233 aaKnown RBP6.78□□□□□ -1.32
CPSF7-219ENST00000539952 GRM4Q14833 912 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 ANGPT1Q15389 498 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 PLPP4Q5VZY2 271 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 LLGL2Q6P1M3 1020 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 USP17L6PQ6QN14 398 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 MTHFD1LQ6UB35 978 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 KCNT2Q6UVM3 1135 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-219ENST00000539952 CCDC105Q8IYK2 499 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 TDRD5Q8NAT2 981 aaKnown RBP6.78□□□□□ -1.32
CPSF7-219ENST00000539952 DTWD2Q8NBA8 298 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 FLCNQ8NFG4 579 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 ZNF558Q96NG5 402 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 TMEM117Q9H0C3 514 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 TMX1Q9H3N1 280 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 POMKQ9H5K3 350 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 ERVK-5Q9HDB9 667 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 JADE2Q9NQC1 790 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 DBR1Q9UK59 544 aaKnown RBP6.78□□□□□ -1.32
CPSF7-219ENST00000539952 ST3GAL5Q9UNP4 418 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 TELO2Q9Y4R8 837 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 TRIOO75962 3097 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 CFAP54Q96N23 3096 aa6.78□□□□□ -1.32
CPSF7-219ENST00000539952 C2orf71A6NGG8 1288 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 IFIT3O14879 490 aaKnown RBP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 CYTH3O43739 400 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 HBP1O60381 514 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 ITGB5P18084 799 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 ALDH7A1P49419 539 aaKnown RBP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 MCM2P49736 904 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 CRYBB1P53674 252 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 ZNF445P59923 1031 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 APOBRQ0VD83 1088 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 MTMR1Q13613 665 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 SART3Q15020 963 aaKnown RBP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 PLCB4Q15147 1175 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 NONOQ15233 471 aaKnown RBP eCLIP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 TMEM266Q2M3C6 531 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 PROX2Q3B8N5 592 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 CWC27Q6UX04 472 aaKnown RBP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 OTOP3Q7RTS5 596 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 CATIPQ7Z7H3 387 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 ZSCAN30Q86W11 494 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 PPFIBP1Q86W92 1011 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 PARP9Q8IXQ6 854 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 KIAA0319LQ8IZA0 1049 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 ABI1Q8IZP0 508 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 RSPH1Q8WYR4 309 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 RMDN1Q96DB5 314 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 RRP36Q96EU6 259 aaKnown RBP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 CASD1Q96PB1 797 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 MAP3K14Q99558 947 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 LZTS2Q9BRK4 669 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 GZF1Q9H116 711 aaPredicted RBP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 PDCL3Q9H2J4 239 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 KDM4CQ9H3R0 1056 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 PSTPIP2Q9H939 334 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 DZANK1Q9NVP4 752 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 IGSF9Q9P2J2 1179 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 WNT16Q9UBV4 365 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 SLC9A2Q9UBY0 812 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 GINS2Q9Y248 185 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 NOC2LQ9Y3T9 749 aaKnown RBP6.77□□□□□ -1.33
CPSF7-219ENST00000539952 HCFC2Q9Y5Z7 792 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 UBIAD1Q9Y5Z9 338 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 IRAK3Q9Y616 596 aa6.77□□□□□ -1.33
CPSF7-219ENST00000539952 SPDYE3A6NKU9 549 aa6.76□□□□□ -1.33
CPSF7-219ENST00000539952 EPB41L2O43491 1005 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms