RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 LONP1P36776 959 aaKnown RBP12.92□□□□□ -0.34
NEK6-212ENST00000539416 COPS2P61201 443 aa12.92□□□□□ -0.34
NEK6-212ENST00000539416 USP4Q13107 963 aa12.92□□□□□ -0.34
NEK6-212ENST00000539416 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
NEK6-212ENST00000539416 DNAAF5Q86Y56 855 aa12.92□□□□□ -0.34
NEK6-212ENST00000539416 TAF4BQ92750 862 aa12.92□□□□□ -0.34
NEK6-212ENST00000539416 EPB41L4BQ9H329 900 aa12.92□□□□□ -0.34
NEK6-212ENST00000539416 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
NEK6-212ENST00000539416 ASB3Q9Y575 518 aa12.92□□□□□ -0.34
NEK6-212ENST00000539416 BICDL2A1A5D9 508 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 SCNN1DP51172 638 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 PLS1Q14651 629 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 RPS6KA1Q15418 735 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 ENOX2Q16206 610 aaKnown RBP12.91□□□□□ -0.34
NEK6-212ENST00000539416 KIAA0753Q2KHM9 967 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 UBAP2Q5T6F2 1119 aaKnown RBP12.91□□□□□ -0.34
NEK6-212ENST00000539416 ARHGAP27Q6ZUM4 889 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 KIAA0825Q8IV33 1275 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 TEX9Q8N6V9 391 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 TBC1D5Q92609 795 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 AZI2Q9H6S1 392 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 KBTBD4Q9NVX7 518 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 CDK5RAP2Q96SN8 1893 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 FOCADQ5VW36 1801 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 PYGBP11216 843 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 GNAZP19086 355 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 SEC23AQ15436 765 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 APOBEC3HQ6NTF7 200 aaKnown RBP12.91□□□□□ -0.34
NEK6-212ENST00000539416 TRIM74Q86UV6 250 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 TRIM73Q86UV7 250 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 PLCD4Q9BRC7 762 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 RAB17Q9H0T7 212 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 LRRC42Q9Y546 428 aa12.91□□□□□ -0.34
NEK6-212ENST00000539416 DICER1Q9UPY3 1922 aaKnown RBP12.91□□□□□ -0.34
NEK6-212ENST00000539416 A0A087X0T9 212 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 NPTXRO95502 500 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 OAS1P00973 400 aaKnown RBP12.9□□□□□ -0.34
NEK6-212ENST00000539416 FAM228BP0C875 321 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
NEK6-212ENST00000539416 ATP11AP98196 1134 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 ASRGL1Q7L266 308 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 ANKS1AQ92625 1134 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 IQCDQ96DY2 449 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 TRIM51Q9BSJ1 452 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 WDR35Q9P2L0 1181 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 ARPP21Q9UBL0 812 aaPredicted RBP12.9□□□□□ -0.34
NEK6-212ENST00000539416 TNKSO95271 1327 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 LGR5O75473 907 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 LMNB1P20700 586 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 PCK1P35558 622 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 ZNF131P52739 623 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 ARID5AQ03989 594 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 RNASELQ05823 741 aaKnown RBP12.9□□□□□ -0.34
NEK6-212ENST00000539416 KCNMA1Q12791 1236 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 SEPT2Q15019 361 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 RNF220Q5VTB9 566 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 ZFAND2BQ8WV99 257 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 GORASP1Q9BQQ3 440 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 TXLNGYQ9BZA5 131 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 TMEM60Q9H2L4 133 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 HDAC9Q9UKV0 1011 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 NOC2LQ9Y3T9 749 aaKnown RBP12.9□□□□□ -0.34
NEK6-212ENST00000539416 LAMB1P07942 1786 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 ADAMTSL1Q8N6G6 1762 aa12.9□□□□□ -0.34
NEK6-212ENST00000539416 NAV1Q8NEY1 1877 aa12.9□□□□□ -0.35
NEK6-212ENST00000539416 KRIT1O00522 736 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 PPFIA2O75334 1257 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 RPS12P25398 132 aaKnown RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 EIF6P56537 245 aaKnown RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 ARHGAP22Q7Z5H3 698 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 FITM2Q8N6M3 262 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 METTL13Q8N6R0 699 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 KIAA0895Q8NCT3 520 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 UHMK1Q8TAS1 419 aaKnown RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 ACTRT1Q8TDG2 376 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 UTP4Q969X6 686 aaKnown RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 RPS6KC1Q96S38 1066 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
NEK6-212ENST00000539416 PCMTD2Q9NV79 361 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 USP40Q9NVE5 1235 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 FGFR1OP2Q9NVK5 253 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 USP15Q9Y4E8 981 aaPredicted RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 DDX60LQ5H9U9 1706 aaKnown RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 SBF1O95248 1867 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 FGRP09769 529 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 PCP11498 1178 aaKnown RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 ALDH3A1P30838 453 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 NLRP5P59047 1200 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 MAN2A1Q16706 1144 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 SLC9C1Q4G0N8 1177 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 CDC42EP5Q6NZY7 148 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 TMEM154Q6P9G4 183 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 SPATA21Q7Z572 469 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 MTMR14Q8NCE2 650 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 PHC3Q8NDX5 983 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 ATP8B4Q8TF62 1192 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms