RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	SUGCT	Q9HAC7	445 aa		13.76	□□□□□ -0.21
CLTCL1-205	ENST00000538828	CDHR5	Q9HBB8	845 aa		13.76	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ADGRA3	Q8IWK6	1321 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828		C9IYK1	514 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	DGAT1	O75907	488 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ARHGEF15	O94989	841 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	RPA1	P27694	616 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	GJB2	P29033	226 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	NFX1	Q12986	1120 aa	Known RBP	13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	MXD4	Q14582	209 aa	Predicted RBP	13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TMEM266	Q2M3C6	531 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	C4orf32	Q8N8J7	132 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	INTS4	Q96HW7	963 aa	Known RBP	13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	OSMR	Q99650	979 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PLVAP	Q9BX97	442 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	DACT1	Q9NYF0	836 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	RGL1	Q9NZL6	768 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	DBR1	Q9UK59	544 aa	Known RBP	13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SMC3	Q9UQE7	1217 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	GINS2	Q9Y248	185 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	MTCH2	Q9Y6C9	303 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PRUNE2	Q8WUY3	3088 aa		13.75	□□□□□ -0.21
CLTCL1-205	ENST00000538828	DENND3	A2RUS2	1198 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	HOXA2	O43364	376 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	LPXN	O60711	386 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ZSCAN20	P17040	1043 aa	Predicted RBP	13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PDC	P20941	246 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	FOSB	P53539	338 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	POLG	P54098	1239 aa	Predicted RBP	13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	HAUS3	Q68CZ6	603 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SRGAP1	Q7Z6B7	1085 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TPH2	Q8IWU9	490 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	FIBCD1	Q8N539	461 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SLC17A8	Q8NDX2	589 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PSPC1	Q8WXF1	523 aa	Known RBP	13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ARNTL2	Q8WYA1	636 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	NACC1	Q96RE7	527 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ADAM2	Q99965	735 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	LMAN2L	Q9H0V9	348 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TMEM161A	Q9NX61	479 aa		13.74	□□□□□ -0.21
CLTCL1-205	ENST00000538828	CARNS1	A5YM72	827 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828		H3BNC9	293 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	UPP2	O95045	317 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	EOMES	O95936	686 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	LINC00271	P0C7V0	271 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SPATA31C1	P0DKV0	1188 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SKI	P12755	728 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SFPQ	P23246	707 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	RARRES1	P49788	294 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TOB1	P50616	345 aa	Predicted RBP	13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	NPEPPS	P55786	919 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	GRB10	Q13322	594 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	CTTN	Q14247	550 aa	Known RBP	13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ZNF174	Q15697	407 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	EPC2	Q52LR7	807 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	XKR9	Q5GH70	373 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	FAM117B	Q6P1L5	589 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TMEM192	Q8IY95	271 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	IGSF22	Q8N9C0	903 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	FBXO22	Q8NEZ5	403 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	NLRP7	Q8WX94	980 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	P2RX5	Q93086	422 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	MTR	Q99707	1265 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	NFKBIZ	Q9BYH8	718 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PCDHB7	Q9Y5E2	793 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	COL4A3BP	Q9Y5P4	624 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	CUL9	Q8IWT3	2517 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	NLRC5	Q86WI3	1866 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ARID2	Q68CP9	1835 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828	NCOR1	O75376	2440 aa		13.73	□□□□□ -0.21
CLTCL1-205	ENST00000538828		A0A0U1RQF3	1178 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	TMEM150B	A6NC51	233 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	EPOP	A6NHQ4	379 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	POTEM	A6NI47	508 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828		H3BQV1	296 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	SLC26A4	O43511	780 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	MGEA5	O60502	916 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	ZNF623	O75123	536 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	BMP15	O95972	392 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PDIA4	P13667	645 aa	Known RBP	13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	IGFBP4	P22692	258 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	BMPR1A	P36894	532 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	CYP4A11	Q02928	519 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PTGDR	Q13258	359 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	DRP2	Q13474	957 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	BTG3	Q14201	252 aa	Predicted RBP	13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	EMC2	Q15006	297 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PTPRO	Q16827	1216 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	CSPP1	Q1MSJ5	1256 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	LARP1B	Q659C4	914 aa	Known RBP	13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	PLA2G4F	Q68DD2	849 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	BRAP	Q7Z569	592 aa		13.72	□□□□□ -0.21
CLTCL1-205	ENST00000538828	FERMT3	Q86UX7	667 aa		13.72	□□□□□ -0.21

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