RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 KAZALD1Q96I82 304 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 CGREF1Q99674 301 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 SLC26A6Q9BXS9 759 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 TAOK3Q9H2K8 898 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 SAR1AQ9NR31 198 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 NR2E3Q9Y5X4 410 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 NWD2Q9ULI1 1742 aa13.38□□□□□ -0.27
USP3-203ENST00000538686 KANSL1LA0AUZ9 987 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 KRIT1O00522 736 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 PSMG1O95456 288 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 SLC1A4P43007 532 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 TRPC1P48995 793 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 DSG1Q02413 1049 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 WDR72Q3MJ13 1102 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
USP3-203ENST00000538686 SH3D19Q5HYK7 790 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 TTI2Q6NXR4 508 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 PHLDB2Q86SQ0 1253 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 SGMS1Q86VZ5 419 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 NUP93Q8N1F7 819 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 FNDC8Q8TC99 324 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 SLC7A6OSQ96CW6 309 aaPredicted RBP13.37□□□□□ -0.27
USP3-203ENST00000538686 ERP27Q96DN0 273 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 RUNDC3BQ96NL0 473 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 EPB41L4BQ9H329 900 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 PARP2Q9UGN5 583 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 ALKQ9UM73 1620 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 PITPNM2Q9BZ72 1349 aa13.37□□□□□ -0.27
USP3-203ENST00000538686 A8MXQ7 604 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 MATN2O00339 956 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ZCCHC18P0CG32 403 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ETS2P15036 469 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 FUT4P22083 530 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 S100A1P23297 94 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 EPHB2P29323 1055 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 DRG2P55039 364 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 FBLN2P98095 1184 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 MGAT5Q09328 741 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 CLUL1Q15846 466 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 SLC9C1Q4G0N8 1177 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 KHDC1Q4VXA5 237 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 C10orf76Q5T2E6 689 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ARHGEF18Q6ZSZ5 1173 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ACAD11Q709F0 780 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ANKRD13CQ8N6S4 541 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ANKLE1Q8NAG6 615 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 NRG4Q8WWG1 115 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ANKS1AQ92625 1134 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 TGS1Q96RS0 853 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 DBNDD2Q9BQY9 259 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 BLZF1Q9H2G9 400 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ARHGEF38Q9NXL2 777 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 HAO1Q9UJM8 370 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ZNF180Q9UJW8 692 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 STXBP5LQ9Y2K9 1186 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 STARD13Q9Y3M8 1113 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 NOC2LQ9Y3T9 749 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 ABCB11O95342 1321 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 FAM187AA6NFU0 413 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 LSM1O15116 133 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 DEXIO95424 95 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 DDX58O95786 925 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 KLK7P49862 253 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 CLCN2P51788 898 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 EIF4A1P60842 406 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 RPL26P61254 145 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 CDR2Q01850 454 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 RNASELQ05823 741 aaKnown RBP13.36□□□□□ -0.27
USP3-203ENST00000538686 KRT72Q14CN4 511 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 TMTC3Q6ZXV5 915 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 DAAM2Q86T65 1068 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 ZBED8Q8IZ13 594 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 RASGEF1CQ8N431 466 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 SCAIQ8N9R8 606 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 KIAA1683Q9H0B3 1180 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 DNAJB4Q9UDY4 337 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 SSX2IPQ9Y2D8 614 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 GDAQ9Y2T3 454 aa13.36□□□□□ -0.27
USP3-203ENST00000538686 TRIM49BA6NDI0 452 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
USP3-203ENST00000538686 PDE5AO76074 875 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 ZWINTO95229 277 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 TXKP42681 527 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 DNA2P51530 1060 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 ARPC4P59998 168 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 MAP3K10Q02779 954 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 TFCP2Q12800 502 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 STRN3Q13033 797 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 MICU3Q86XE3 530 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 IL17REQ8NFR9 667 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 CCDC113Q9H0I3 377 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 DDX47Q9H0S4 455 aaKnown RBP13.35□□□□□ -0.27
USP3-203ENST00000538686 HESX1Q9UBX0 185 aa13.35□□□□□ -0.27
USP3-203ENST00000538686 MTRF1LQ9UGC7 380 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms