RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TTI1O43156 1089 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 DAPK3O43293 454 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 BUB1BO60566 1050 aaPredicted RBP13.02□□□□□ -0.33
CPNE8-203ENST00000538596 CYP3A4P08684 503 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 ARP10275 920 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 HPDP32754 393 aaPredicted RBP13.02□□□□□ -0.33
CPNE8-203ENST00000538596 SLC35G2Q8TBE7 412 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 GPR88Q9GZN0 384 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.33
CPNE8-203ENST00000538596 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.33
CPNE8-203ENST00000538596 FAM169AQ9Y6X4 670 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 TCP10L2B9ZVM9 353 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 NR1D1P20393 614 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 SOX5P35711 763 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 PDE6BP35913 854 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 HSPA9P38646 679 aaKnown RBP13.02□□□□□ -0.33
CPNE8-203ENST00000538596 STAT1P42224 750 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 STAT2P52630 851 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.33
CPNE8-203ENST00000538596 SLFN11Q7Z7L1 901 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 VPS36Q86VN1 386 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 SLC30A5Q8TAD4 765 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 ARHGEF26Q96DR7 871 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 TRIM31Q9BZY9 425 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 LRRC4CQ9HCJ2 640 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 FBXL5Q9UKA1 691 aa13.02□□□□□ -0.33
CPNE8-203ENST00000538596 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 NDUFAB1O14561 156 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 GAS7O60861 476 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 SEC24CP53992 1094 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 ODR4Q5SWX8 454 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 BTNL9Q6UXG8 535 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 ZNF720Q7Z2F6 126 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 FAM178BQ8IXR5 827 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 SH2D3AQ9BRG2 576 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 DPH5Q9H2P9 285 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 CLRN2A0PK11 232 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 CES2O00748 559 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 FERP16591 822 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 GAP43P17677 238 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 LSP1P33241 339 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 LIG3P49916 1009 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 PRPF4BQ13523 1007 aaKnown RBP13.01□□□□□ -0.33
CPNE8-203ENST00000538596 DCAF12L1Q5VU92 463 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 TRMT1LQ7Z2T5 733 aaKnown RBP13.01□□□□□ -0.33
CPNE8-203ENST00000538596 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 ATP6V1G3Q96LB4 118 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 UNC45AQ9H3U1 944 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 AGPAT3Q9NRZ7 376 aa13.01□□□□□ -0.33
CPNE8-203ENST00000538596 CHORDC1Q9UHD1 332 aaPredicted RBP13.01□□□□□ -0.33
CPNE8-203ENST00000538596 PIK3CDO00329 1044 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 FGGP02679 453 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 CHRNA5P30532 468 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 DLG4P78352 724 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 ZNF211Q13398 564 aaPredicted RBP13□□□□□ -0.33
CPNE8-203ENST00000538596 KDM7AQ6ZMT4 941 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 HOOK2Q96ED9 719 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 HES6Q96HZ4 224 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 TRIM51Q9BSJ1 452 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 PCIF1Q9H4Z3 704 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13□□□□□ -0.33
CPNE8-203ENST00000538596 SUCLA2Q9P2R7 463 aaPredicted RBP13□□□□□ -0.33
CPNE8-203ENST00000538596 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 SLX4Q8IY92 1834 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 GTPBP10A4D1E9 387 aaKnown RBP13□□□□□ -0.33
CPNE8-203ENST00000538596 H0YGN5 161 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 EIF3DO15371 548 aaKnown RBP eCLIP13□□□□□ -0.33
CPNE8-203ENST00000538596 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
CPNE8-203ENST00000538596 MCTP2Q6DN12 878 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 AADACL2Q6P093 401 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 CD302Q8IX05 232 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 UBLCP1Q8WVY7 318 aaPredicted RBP13□□□□□ -0.33
CPNE8-203ENST00000538596 SLC5A5Q92911 643 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 MRIQ9BWK5 157 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 STK33Q9BYT3 514 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 FAM107BQ9H098 131 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 INTS2Q9H0H0 1204 aaKnown RBP13□□□□□ -0.33
CPNE8-203ENST00000538596 THAP2Q9H0W7 228 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 TUFT1Q9NNX1 390 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 NFS1Q9Y697 457 aa13□□□□□ -0.33
CPNE8-203ENST00000538596 PRELPP51888 382 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 ITGB3BPQ13352 177 aaPredicted RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 PPP2R5CQ13362 524 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 ZSWIM2Q8NEG5 633 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 SLC20A1Q8WUM9 679 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 ZNF577Q9BSK1 485 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 BCCIPQ9P287 314 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 AMFRQ9UKV5 643 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 COG5Q9UP83 839 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 FOXN3O00409 490 aaPredicted RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 POLR2MP0CAP2 368 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
CPNE8-203ENST00000538596 CEP55Q53EZ4 464 aa12.99□□□□□ -0.33
CPNE8-203ENST00000538596 RASGEF1CQ8N431 466 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms