RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 FRMD5Q7Z6J6 570 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 EPS8L3Q8TE67 593 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.11■□□□□ 0.812e-6■■■■■ 31.8
SFSWAP-207ENST00000538548 ARMCX3Q9UH62 379 aaPredicted RBP20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 A8MUI8 341 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 NTSR2O95665 410 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 GALCP54803 685 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 JAM2P57087 298 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 MFSD5Q6N075 450 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 KIF2BQ8N4N8 673 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 U2AF1L4Q8WU68 220 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 ERVK-5Q9HDB9 667 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 ADAM22Q9P0K1 906 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 MTRF1LQ9UGC7 380 aaKnown RBP20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 PPP1R9AQ9ULJ8 1098 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 NCANO14594 1321 aa20.11■□□□□ 0.81
SFSWAP-207ENST00000538548 RASGRF2O14827 1237 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 PRDX5P30044 214 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 AUHQ13825 339 aaKnown RBP20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 HERC4Q5GLZ8 1057 aaPredicted RBP20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 FBXO33Q7Z6M2 555 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 ZNF444Q8N0Y2 327 aaPredicted RBP20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 DYDC1Q8WWB3 177 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 FGFR1OP2Q9NVK5 253 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 GRHL1Q9NZI5 618 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 LAMB2P55268 1798 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 A6NHS1 94 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 GFPT2O94808 682 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 GJB6O95452 261 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 COPB2P35606 906 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 DHX37Q8IY37 1157 aaKnown RBP20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 RFFLQ8WZ73 363 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 CCDC113Q9H0I3 377 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 OSGEPQ9NPF4 335 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 PARP2Q9UGN5 583 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 KCNG1Q9UIX4 513 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 STK38LQ9Y2H1 464 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 ARL2BPQ9Y2Y0 163 aa20.1■□□□□ 0.81
SFSWAP-207ENST00000538548 EDIL3O43854 480 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 WFS1O76024 890 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 SMARCA1P28370 1054 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 HSPA1LP34931 641 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 SLCO1A2P46721 670 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 MAP2K1Q02750 393 aaPredicted RBP20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 PLS1Q14651 629 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 ADAT2Q7Z6V5 191 aaKnown RBP20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 SLC35G2Q8TBE7 412 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 NT5C3AQ9H0P0 336 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 RXFP1Q9HBX9 757 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 PPATQ06203 517 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 PIGSQ96S52 555 aa20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 BSDC1Q9NW68 430 aaPredicted RBP20.09■□□□□ 0.81
SFSWAP-207ENST00000538548 ANKRD33BA6NCL7 494 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 ENO4A6NNW6 628 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 TCP11X1B4DZS4 312 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 RIPK2O43353 540 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 EVI5O60447 810 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 FERP16591 822 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 ABL2P42684 1182 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 ITPK1Q13572 414 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 EPHA7Q15375 998 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 TEX9Q8N6V9 391 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 ZFATQ9P243 1243 aa20.08■□□□□ 0.81
SFSWAP-207ENST00000538548 hCG_1984214I3L0E3 225 aa20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 TMEM253P0C7T8 217 aa20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 XRCC5P13010 732 aaKnown RBP20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 SKIV2L2P42285 1042 aaKnown RBP20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 HYIQ5T013 277 aa20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 BARGINQ6ZT62 677 aa20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 EXOC3L1Q86VI1 746 aa20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 ZNF713Q8N859 430 aaPredicted RBP20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 USP21Q9UK80 565 aa20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 KDM3AQ9Y4C1 1321 aa20.08■□□□□ 0.8
SFSWAP-207ENST00000538548 RARGP13631 454 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 CCNB1P14635 433 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 SPATA21Q7Z572 469 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 FITM2Q8N6M3 262 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 SPDYE1Q8NFV5 336 aaPredicted RBP20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 SLC30A5Q8TAD4 765 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 RNF217Q8TC41 542 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 NAF1Q96HR8 494 aaKnown RBP20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 ROPN1BQ9BZX4 212 aaPredicted RBP20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 ROPN1Q9HAT0 212 aaPredicted RBP20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 SIX2Q9NPC8 291 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 MAST2Q6P0Q8 1798 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 PODXLO00592 558 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 PHF2O75151 1096 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 LINGO3P0C6S8 592 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 KRT13P13646 458 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 FGFR4P22455 802 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 CHRNA3P32297 505 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 PTGIRP43119 386 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 TAF11Q15544 211 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 UBAP2Q5T6F2 1119 aaKnown RBP20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 NUGGCQ68CJ6 796 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 USP17L2Q6R6M4 530 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 UHMK1Q8TAS1 419 aaKnown RBP20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 PARD3BQ8TEW8 1205 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 RUNDC3BQ96NL0 473 aa20.07■□□□□ 0.8
SFSWAP-207ENST00000538548 YIPF3Q9GZM5 350 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms