RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ZNF668Q96K58 619 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-208ENST00000538070 RPAP3Q9H6T3 665 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-208ENST00000538070 AGPAT3Q9NRZ7 376 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 FAM53CQ9NYF3 392 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 EMSYQ7Z589 1322 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 SSU72P8A0A1W2PR75 194 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 GRID2IPA4D2P6 1211 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 SMIM23A6NLE4 172 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 RBAK-RBAKDNI3L0D1 243 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 FAM153BP0C7A2 387 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 BAATQ14032 418 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-208ENST00000538070 FAM153CQ494X1 144 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 EPC2Q52LR7 807 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 FOXR1Q6PIV2 292 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 CYFIP1Q7L576 1253 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 PRPF38AQ8NAV1 312 aaKnown RBP9.48□□□□□ -0.89
UBE3B-208ENST00000538070 MXRA8Q9BRK3 442 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 POLR3CQ9BUI4 534 aaPredicted RBP9.48□□□□□ -0.89
UBE3B-208ENST00000538070 NUCKS1Q9H1E3 243 aaKnown RBP9.48□□□□□ -0.89
UBE3B-208ENST00000538070 METTL14Q9HCE5 456 aaKnown RBP9.48□□□□□ -0.89
UBE3B-208ENST00000538070 STIM2Q9P246 746 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 FAM153AQ9UHL3 310 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 NAGPAQ9UK23 515 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 HPCAL4Q9UM19 191 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 ZHX2Q9Y6X8 837 aa9.48□□□□□ -0.89
UBE3B-208ENST00000538070 MCM3P25205 808 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 HPDP32754 393 aaPredicted RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 FMO5P49326 533 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 GALCP54803 685 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 NAB2Q15742 525 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 PPP4R3CPQ6ZMV5 832 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 ZNF720Q7Z2F6 126 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 UHMK1Q8TAS1 419 aaKnown RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 AFAP1L1Q8TED9 768 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 TMOD4Q9NZQ9 345 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 CTTNBP2NLQ9P2B4 639 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 LARSQ9P2J5 1176 aaKnown RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 FEM1BQ9UK73 627 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 GOLGA6CA6NDK9 693 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 KRIT1O00522 736 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 KRT14P02533 472 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 GOLGA6DP0CG33 693 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 GAP43P17677 238 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 HNRNPH3P31942 346 aaKnown RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 GJC1P36383 396 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 CDK17Q00537 523 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 EPHA7Q15375 998 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 UGCGQ16739 394 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 C2CD6Q53TS8 623 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 ZFYVE27Q5T4F4 411 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 POTEAQ6S8J7 498 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 IRF2BP2Q7Z5L9 587 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 SLC20A1Q8WUM9 679 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 CTNNBL1Q8WYA6 563 aaPredicted RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 IQCDQ96DY2 449 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 WRNIP1Q96S55 665 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 INTS2Q9H0H0 1204 aaKnown RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 GOLGA6AQ9NYA3 693 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 TELO2Q9Y4R8 837 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 CDK5RAP2Q96SN8 1893 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 FOXN3O00409 490 aaPredicted RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 HSF2BPO75031 334 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 VIL1P09327 827 aaKnown RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 ITGA4P13612 1032 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 KRT5P13647 590 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 SSR1P43307 286 aaKnown RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 COBLL1Q53SF7 1204 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 RNF207Q6ZRF8 634 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 PALB2Q86YC2 1186 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 HNRNPLLQ8WVV9 542 aaKnown RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 FAM212AQ96EL1 285 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 CELF4Q9BZC1 486 aaKnown RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 TOPORSQ9NS56 1045 aaPredicted RBP9.47□□□□□ -0.89
UBE3B-208ENST00000538070 TRAF3IP3Q9Y228 551 aa9.47□□□□□ -0.89
UBE3B-208ENST00000538070 DDX3XO00571 662 aaKnown RBP eCLIP9.46□□□□□ -0.89
UBE3B-208ENST00000538070 CIITAP33076 1130 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 ITGB3BPQ13352 177 aaPredicted RBP9.46□□□□□ -0.89
UBE3B-208ENST00000538070 ASTE1Q2TB18 679 aaPredicted RBP9.46□□□□□ -0.89
UBE3B-208ENST00000538070 TKFCQ3LXA3 575 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 MOXD1Q6UVY6 613 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 BTNL9Q6UXG8 535 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 FAM160B2Q86V87 743 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 TSEN2Q8NCE0 465 aaKnown RBP9.46□□□□□ -0.89
UBE3B-208ENST00000538070 CRYGNQ8WXF5 182 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 RPGRIP1Q96KN7 1286 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 CEP170P1Q96L14 293 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 MRIQ9BWK5 157 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 TAOK3Q9H2K8 898 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 PLCB1Q9NQ66 1216 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 RIPK3Q9Y572 518 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 LY75O60449 1722 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 CNTNAP1P78357 1384 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 ZBED4O75132 1171 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 YWHABP31946 246 aaKnown RBP9.46□□□□□ -0.89
UBE3B-208ENST00000538070 TRAF1Q13077 416 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 MESDQ14696 234 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 CFAP58Q5T655 872 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 SNRNP48Q6IEG0 339 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms