RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 RCN1Q15293 331 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 WDR72Q3MJ13 1102 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 CMPK2Q5EBM0 449 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 WDR78Q5VTH9 848 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 RFX8Q6ZV50 586 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 TMEM110Q86TL2 294 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 METTL13Q8N6R0 699 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 MARCH10Q8NA82 808 aaPredicted RBP11.53□□□□□ -0.56
RTN3-208ENST00000537981 NCSTNQ92542 709 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 ANKRD27Q96NW4 1050 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 FMO2Q99518 471 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 CORO1BQ9BR76 489 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 TMCO1Q9UM00 188 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 ARL2BPQ9Y2Y0 163 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 WASF2Q9Y6W5 498 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 RPTORQ8N122 1335 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
RTN3-208ENST00000537981 MYH3P11055 1940 aa11.53□□□□□ -0.56
RTN3-208ENST00000537981 VEGFAP15692 232 aaPredicted RBP11.52□□□□□ -0.56
RTN3-208ENST00000537981 HOXC9P31274 260 aa11.52□□□□□ -0.56
RTN3-208ENST00000537981 GRIA2P42262 883 aa11.52□□□□□ -0.56
RTN3-208ENST00000537981 PLTPP55058 493 aa11.52□□□□□ -0.56
RTN3-208ENST00000537981 NAB2Q15742 525 aa11.52□□□□□ -0.56
RTN3-208ENST00000537981 FAM114A1Q8IWE2 563 aa11.52□□□□□ -0.56
RTN3-208ENST00000537981 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.56
RTN3-208ENST00000537981 NMD3Q96D46 503 aaKnown RBP11.52□□□□□ -0.56
RTN3-208ENST00000537981 ERGIC2Q96RQ1 377 aa11.52□□□□□ -0.56
RTN3-208ENST00000537981 IQCGQ9H095 443 aaKnown RBP11.52□□□□□ -0.56
RTN3-208ENST00000537981 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.56
RTN3-208ENST00000537981 TUT1Q9H6E5 874 aaKnown RBP11.52□□□□□ -0.56
RTN3-208ENST00000537981 ERVK-5Q9HDB9 667 aa11.52□□□□□ -0.56
RTN3-208ENST00000537981 CHKBQ9Y259 395 aa11.52□□□□□ -0.56
RTN3-208ENST00000537981 DCCP43146 1447 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 A0A1W2PQJ5 194 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 TMEM120BA0PK00 339 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 FAM196BA6NMK8 535 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 HNRNPCP07910 306 aaKnown RBP eCLIP11.52□□□□□ -0.573e-6■■■□□ 17
RTN3-208ENST00000537981 ITGA2BP08514 1039 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 HOXB7P09629 217 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 ZRSR2Q15696 482 aaKnown RBP11.52□□□□□ -0.57
RTN3-208ENST00000537981 LONRF1Q17RB8 773 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 VSTM1Q6UX27 236 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
RTN3-208ENST00000537981 COPS6Q7L5N1 327 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 SLC15A3Q8IY34 581 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 RIBC1Q8N443 379 aaPredicted RBP11.52□□□□□ -0.57
RTN3-208ENST00000537981 NBPF15Q8N660 670 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 NGDNQ8NEJ9 315 aaKnown RBP11.52□□□□□ -0.57
RTN3-208ENST00000537981 FBXO25Q8TCJ0 367 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 LRRC8CQ8TDW0 803 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 MIPEPQ99797 713 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.57
RTN3-208ENST00000537981 ZMYND12Q9H0C1 365 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 NSRP1Q9H0G5 558 aaKnown RBP11.52□□□□□ -0.57
RTN3-208ENST00000537981 BABAM1Q9NWV8 329 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
RTN3-208ENST00000537981 TBX10O75333 385 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 ASLP04424 464 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 LYNP07948 512 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 AUHQ13825 339 aaKnown RBP11.51□□□□□ -0.57
RTN3-208ENST00000537981 GIT2Q14161 759 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 HOOK3Q86VS8 718 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 FAM133AQ8N9E0 248 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 ADAMTS19Q8TE59 1207 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 PGM2Q96G03 612 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 HIC2Q96JB3 615 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 HAPLN3Q96S86 360 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 SRPK1Q96SB4 655 aaKnown RBP11.51□□□□□ -0.57
RTN3-208ENST00000537981 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.51□□□□□ -0.57
RTN3-208ENST00000537981 OXCT2Q9BYC2 517 aaPredicted RBP11.51□□□□□ -0.57
RTN3-208ENST00000537981 LRMDAQ9H2I8 198 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 KRT82Q9NSB4 513 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 ZDHHC18Q9NUE0 388 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 SPATA7Q9P0W8 599 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 ADAMTS1Q9UHI8 967 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 PYGMP11217 842 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 ALOX15P16050 662 aaPredicted RBP11.51□□□□□ -0.57
RTN3-208ENST00000537981 GALK1P51570 392 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 PMS2P54278 862 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 RPS6KA1Q15418 735 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 RTN1Q16799 776 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 APLFQ8IW19 511 aaPredicted RBP11.51□□□□□ -0.57
RTN3-208ENST00000537981 ZSCAN29Q8IWY8 852 aaPredicted RBP11.51□□□□□ -0.57
RTN3-208ENST00000537981 MIPOL1Q8TD10 442 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 ANKS1AQ92625 1134 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
RTN3-208ENST00000537981 CLMNQ96JQ2 1002 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 TRIM7Q9C029 511 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 SNX24Q9Y343 169 aa11.51□□□□□ -0.57
RTN3-208ENST00000537981 RGPD8O14715 1765 aaPredicted RBP11.51□□□□□ -0.57
RTN3-208ENST00000537981 GSTA2P09210 222 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 VHLP40337 213 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 GJA8P48165 433 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 PPP4CP60510 307 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 NPY5RQ15761 445 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 PKN1Q16512 942 aa11.5□□□□□ -0.57
RTN3-208ENST00000537981 EXOC3L4Q17RC7 722 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms