RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 ANAPC7Q9UJX3 599 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 SCAF8Q9UPN6 1271 aaKnown RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 MCF2LO15068 1137 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 SRGAP2O75044 1071 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 PDHBP11177 359 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 PSMC5P62195 406 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 PDE1BQ01064 536 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 PPP1R2P3Q6NXS1 205 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 ERICH1Q86X53 443 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 VGLL2Q8N8G2 317 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 SAAL1Q96ER3 474 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 CNOT8Q9UFF9 292 aaKnown RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 PALMO75781 387 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 ARL4AP40617 200 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 TROAPQ12815 778 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 PDIA5Q14554 519 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 ZNF568Q3ZCX4 644 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 ZNF746Q6NUN9 644 aaPredicted RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 ARHGAP24Q8N264 748 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 TCP11Q8WWU5 503 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 CNOT7Q9UIV1 285 aaKnown RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 ANAPC5Q9UJX4 755 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 OATP04181 439 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 FDX1P10109 184 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 TPD52P55327 224 aaPredicted RBP10.83□□□□□ -0.68
GGA3-201ENST00000537686 GFPT1Q06210 699 aaPredicted RBP10.83□□□□□ -0.68
GGA3-201ENST00000537686 KCNB1Q14721 858 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 IQCB1Q15051 598 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 ANKRD40Q6AI12 368 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 HHIPL2Q6UWX4 724 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 HAUS6Q7Z4H7 955 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 DHX40Q8IX18 779 aaKnown RBP10.83□□□□□ -0.68
GGA3-201ENST00000537686 OR6B3Q8NGW1 331 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 FMO2Q99518 471 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 NYAP2Q9P242 653 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 PCDHA10Q9Y5I2 948 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 SPDYE16A6NNV3 312 aaPredicted RBP10.83□□□□□ -0.68
GGA3-201ENST00000537686 ATP8B1O43520 1251 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 ACTN1P12814 892 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 CCT5P48643 541 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 RWDD2BP57060 319 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 EPHA7Q15375 998 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 ZKSCAN8Q15776 578 aaPredicted RBP10.83□□□□□ -0.68
GGA3-201ENST00000537686 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 TMEM270Q6UE05 265 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 C16orf86Q6ZW13 317 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 PASD1Q8IV76 773 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 TMEM35BQ8NCS4 154 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 CDKL2Q92772 493 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 KIAA1586Q9HCI6 787 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 DNAJC17Q9NVM6 304 aaKnown RBP10.83□□□□□ -0.68
GGA3-201ENST00000537686 CACNA1FO60840 1977 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 USP27XA6NNY8 438 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 PRPSAP2O60256 369 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 ENTPD3O75355 529 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 NMT1P30419 496 aaKnown RBP10.83□□□□□ -0.68
GGA3-201ENST00000537686 PCK1P35558 622 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 VAMP7P51809 220 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 MTMR2Q13614 643 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 CASP8Q14790 479 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 MTF1Q14872 753 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 DRAP1Q14919 205 aaPredicted RBP10.83□□□□□ -0.68
GGA3-201ENST00000537686 SLC15A2Q16348 729 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 CDO1Q16878 200 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 KIAA1841Q6NSI8 718 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 CYFIP1Q7L576 1253 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 METTL23Q86XA0 190 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 C2orf69Q8N8R5 385 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 C11orf70Q9BRQ4 267 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 PRR12Q9ULL5 1215 aa10.83□□□□□ -0.68
GGA3-201ENST00000537686 GPR75-ASB3A0A0A6YYF3 556 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 ZRANB2O95218 330 aaKnown RBP eCLIP10.82□□□□□ -0.68
GGA3-201ENST00000537686 ZNF18P17022 549 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 STK4Q13043 487 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 BAATQ14032 418 aaPredicted RBP10.82□□□□□ -0.68
GGA3-201ENST00000537686 NAA30Q147X3 362 aaPredicted RBP10.82□□□□□ -0.68
GGA3-201ENST00000537686 BBS9Q3SYG4 887 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 DNAAF3Q8N9W5 541 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 PPP4R1Q8TF05 950 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 PPP1R12CQ9BZL4 782 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 CCDC68Q9H2F9 335 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 TMEM60Q9H2L4 133 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 ABCB6Q9NP58 842 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 STK38LQ9Y2H1 464 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 KCPQ6ZWJ8 1503 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 EYA4O95677 639 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 FMR1Q06787 632 aaKnown RBP eCLIP10.82□□□□□ -0.68
GGA3-201ENST00000537686 ARHGEF6Q15052 776 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 SPATA24Q86W54 205 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 SIX6OS1Q8N1H7 587 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 ZNF302Q9NR11 478 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 NFU1Q9UMS0 254 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 FAM208AQ9UK61 1670 aaKnown RBP10.82□□□□□ -0.68
GGA3-201ENST00000537686 CCDC188H7C350 402 aa10.82□□□□□ -0.68
GGA3-201ENST00000537686 ARPP19P56211 112 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms