RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 MTMR3Q13615 1198 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 ALCAMQ13740 583 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 HIC1Q14526 733 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 RESP18Q5W5W9 173 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 DENND2CQ68D51 928 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 INTS8Q75QN2 995 aaKnown RBP4.4□□□□□ -1.71
SEC23A-202ENST00000537403 TAOK1Q7L7X3 1001 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 LDHDQ86WU2 507 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 PALM2Q8IXS6 379 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 NME8Q8N427 588 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 SRBD1Q8N5C6 995 aaKnown RBP4.4□□□□□ -1.71
SEC23A-202ENST00000537403 TAB3Q8N5C8 712 aaPredicted RBP4.4□□□□□ -1.71
SEC23A-202ENST00000537403 CCDC110Q8TBZ0 833 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 TSC1Q92574 1164 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 MAGOHBQ96A72 148 aaKnown RBP4.4□□□□□ -1.71
SEC23A-202ENST00000537403 FAM81BQ96LP2 452 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 SNX25Q9H3E2 840 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 THAP9Q9H5L6 903 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 ADAMTS1Q9UHI8 967 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 ABCB11O95342 1321 aa4.4□□□□□ -1.71
SEC23A-202ENST00000537403 H7C0C1 242 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 CLDN3O15551 220 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 CRCPO75575 148 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 MAPK4P31152 587 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 HOXA7P31268 230 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 QARSP47897 775 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 ATP5OP48047 213 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 RFX5P48382 616 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 EXOSC10Q01780 885 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 NEDD9Q14511 834 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 MAPK6Q16659 721 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 SLFN12LQ6IEE8 588 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 PPP1R18Q6NYC8 613 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 FBXO33Q7Z6M2 555 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 METTL23Q86XA0 190 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 CLEC10AQ8IUN9 316 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 BANK1Q8NDB2 785 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 UHMK1Q8TAS1 419 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 HLA-CQ95604 372 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 MSTO1Q9BUK6 570 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 MXD3Q9BW11 206 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 RABEP2Q9H5N1 569 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 ACAD9Q9H845 621 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 RPF1Q9H9Y2 349 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 LRRC4Q9HBW1 653 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 PGAP2Q9UHJ9 254 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 PHIPQ8WWQ0 1821 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 PVALEFA0A1B0GWK0 134 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 A6NJR5 290 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 PP2D1A8MPX8 630 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 RGS16O15492 202 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 ZBTB24O43167 697 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 ZNF500O60304 480 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 NDUFB10O96000 172 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 P4HBP07237 508 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 GUCY1A2P33402 732 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 CTNNA1P35221 906 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 EIF4A3P38919 411 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 ITKQ08881 620 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 SF3A3Q12874 501 aaKnown RBP eCLIP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 MYO1EQ12965 1108 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 COG2Q14746 738 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 KRT31Q15323 416 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 SURF1Q15526 300 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 SBK1Q52WX2 424 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 SWSAP1Q6NVH7 229 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 CDC42EP5Q6NZY7 148 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 CAPN12Q6ZSI9 719 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 NUDT18Q6ZVK8 323 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 SFR1Q86XK3 245 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 MICALL1Q8N3F8 863 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 XXYLT1Q8NBI6 393 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 GSDMBQ8TAX9 411 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 GRK7Q8WTQ7 553 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 TCP11Q8WWU5 503 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 PSPC1Q8WXF1 523 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 DYDC2Q96IM9 177 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 FAM167AQ96KS9 214 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 RTFDC1Q9BY42 306 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.39□□□□□ -1.714e-6■■■□□ 16.2
SEC23A-202ENST00000537403 GABBR1Q9UBS5 961 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 CDC23Q9UJX2 597 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 FLT1P17948 1338 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 A6NNZ2 444 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 ENTPD3O75355 529 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 LDHAP00338 332 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 OATP04181 439 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 USP11P51784 963 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 ZNF543Q08ER8 600 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 BRD3Q15059 726 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 TUBB8Q3ZCM7 444 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 PRAMEF18Q5VWM3 479 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 ALKBH5Q6P6C2 394 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 POTEGQ6S5H5 508 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 HHIPL2Q6UWX4 724 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 METTL3Q86U44 580 aaKnown RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 VSTM4Q8IW00 320 aa4.39□□□□□ -1.71
SEC23A-202ENST00000537403 FMR1NBQ8N0W7 255 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 GIMAP8Q8ND71 665 aaPredicted RBP4.39□□□□□ -1.71
SEC23A-202ENST00000537403 IGDCC4Q8TDY8 1250 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms