RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 IRAK3Q9Y616 596 aa11.07□□□□□ -0.64
CPSF7-217ENST00000537162 DENND3A2RUS2 1198 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 RFPL2O75678 378 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 TGFB3P10600 412 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 CTSAP10619 480 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 PDHBP11177 359 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 NRLP54845 237 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 FAM189BP81408 668 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 C19orf57Q0VDD7 668 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 PGM5Q15124 567 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 SH3PXD2AQ5TCZ1 1133 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 IER5Q5VY09 327 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 TPRG1Q6ZUI0 275 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 GET4Q7L5D6 327 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-217ENST00000537162 LRRC43Q8N309 656 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 HNRNPLLQ8WVV9 542 aaKnown RBP11.06□□□□□ -0.64
CPSF7-217ENST00000537162 KLHL5Q96PQ7 755 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 TMEM47Q9BQJ4 181 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 UBA5Q9GZZ9 404 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.06□□□□□ -0.64
CPSF7-217ENST00000537162 CELSR3Q9NYQ7 3312 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 MYO18BQ8IUG5 2567 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 DOCK6Q96HP0 2047 aa11.06□□□□□ -0.64
CPSF7-217ENST00000537162 MYH6P13533 1939 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 TSPY2A6NKD2 308 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 CFBP00751 764 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 GOLGA8HP0CJ92 632 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
CPSF7-217ENST00000537162 BCAR1P56945 870 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 SATB1Q01826 763 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 ADCY1Q08828 1119 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 CLLU1OSQ5K130 101 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 TCEAL6Q6IPX3 200 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 METTL7BQ6UX53 244 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 ZNF687Q8N1G0 1237 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
CPSF7-217ENST00000537162 TRAPPC12Q8WVT3 735 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 TCEAL3Q969E4 200 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 ZNF707Q96C28 371 aaPredicted RBP11.05□□□□□ -0.64
CPSF7-217ENST00000537162 MAN1C1Q9NR34 630 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 C1orf112Q9NSG2 853 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 PNMA2Q9UL42 364 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 NEUROG3Q9Y4Z2 214 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 CFAP46Q8IYW2 2715 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 ABCB11O95342 1321 aa11.05□□□□□ -0.64
CPSF7-217ENST00000537162 USP9XQ93008 2570 aaPredicted RBP11.05□□□□□ -0.64
CPSF7-217ENST00000537162 INPPL1O15357 1258 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 CNPP09543 421 aaKnown RBP11.04□□□□□ -0.64
CPSF7-217ENST00000537162 KLRC2P26717 231 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 CDC37Q16543 378 aaPredicted RBP11.04□□□□□ -0.64
CPSF7-217ENST00000537162 RNF43Q68DV7 783 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 PPFIBP1Q86W92 1011 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 IFNL3Q8IZI9 196 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 SMG7Q92540 1137 aaKnown RBP11.04□□□□□ -0.64
CPSF7-217ENST00000537162 STAMQ92783 540 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 LRIG1Q96JA1 1093 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 ST3GAL5Q9UNP4 418 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 MSRB2Q9Y3D2 182 aa11.04□□□□□ -0.64
CPSF7-217ENST00000537162 M0QZ92 97 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 M0R2C6 588 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 APPP05067 770 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 SSBP05455 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
CPSF7-217ENST00000537162 HSD17B4P51659 736 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 CTDSPL2Q05D32 466 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 PPARAQ07869 468 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 DSC3Q14574 896 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 HEATR6Q6AI08 1181 aaKnown RBP11.03□□□□□ -0.64
CPSF7-217ENST00000537162 RSPO2Q6UXX9 243 aaPredicted RBP11.03□□□□□ -0.64
CPSF7-217ENST00000537162 DDX53Q86TM3 631 aaKnown RBP11.03□□□□□ -0.64
CPSF7-217ENST00000537162 CLUAP1Q96AJ1 413 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 CRELD1Q96HD1 420 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 TMEM169Q96HH4 297 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 CHRDQ9H2X0 955 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 ELAC1Q9H777 363 aaKnown RBP11.03□□□□□ -0.64
CPSF7-217ENST00000537162 GINS2Q9Y248 185 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 RAI2Q9Y5P3 530 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 KDM3AQ9Y4C1 1321 aa11.03□□□□□ -0.64
CPSF7-217ENST00000537162 C4orf47A7E2U8 309 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 GPAA1O43292 621 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 TRIM27P14373 513 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 HOXA13P31271 388 aaPredicted RBP11.02□□□□□ -0.65
CPSF7-217ENST00000537162 TCF7P36402 384 aaPredicted RBP11.02□□□□□ -0.65
CPSF7-217ENST00000537162 KRT76Q01546 638 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 GAS6Q14393 721 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 BMS1Q14692 1282 aaKnown RBP11.02□□□□□ -0.65
CPSF7-217ENST00000537162 PLA2G2CQ5R387 149 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 STOX1Q6ZVD7 989 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 MCF2L2Q86YR7 1114 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 RHPN1Q8TCX5 695 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 ARHGAP45Q92619 1136 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 HEBP1Q9NRV9 189 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.02□□□□□ -0.658e-9■■■■■ 27.8
CPSF7-217ENST00000537162 NDRG2Q9UN36 371 aaKnown RBP11.02□□□□□ -0.65
CPSF7-217ENST00000537162 SDK1Q7Z5N4 2213 aa11.02□□□□□ -0.65
CPSF7-217ENST00000537162 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 NCAM2O15394 837 aa11.01□□□□□ -0.65
CPSF7-217ENST00000537162 LILRB3O75022 631 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms