RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ENO2P09104 434 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-207ENST00000536634 COL6A1P12109 1028 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 IGFALSP35858 605 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 DBPQ10586 325 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-207ENST00000536634 PRAMEF18Q5VWM3 479 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 MCTP2Q6DN12 878 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 ZCCHC8Q6NZY4 707 aaKnown RBP7.71□□□□□ -1.18
CLIP1-207ENST00000536634 APPBP2Q92624 585 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 ADAM7Q9H2U9 754 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 CEP350Q5VT06 3117 aa7.71□□□□□ -1.18
CLIP1-207ENST00000536634 RALGAPBQ86X10 1494 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 GOLGB1Q14789 3259 aaKnown RBP7.7□□□□□ -1.18
CLIP1-207ENST00000536634 SCDO00767 359 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 OPA1O60313 960 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 GLRX3O76003 335 aaKnown RBP7.7□□□□□ -1.18
CLIP1-207ENST00000536634 ASLP04424 464 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 GJA4P35212 333 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 IL13P35225 146 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 GLRBP48167 497 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 RGL3Q3MIN7 710 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 EP400NLQ6ZTU2 488 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 C16orf86Q6ZW13 317 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 TXNDC5Q8NBS9 432 aaKnown RBP7.7□□□□□ -1.18
CLIP1-207ENST00000536634 SAMD15Q9P1V8 674 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 ZFP69BQ9UJL9 534 aa7.7□□□□□ -1.18
CLIP1-207ENST00000536634 SPHKAPQ2M3C7 1700 aa7.69□□□□□ -1.18
CLIP1-207ENST00000536634 PXDNQ92626 1479 aa7.69□□□□□ -1.18
CLIP1-207ENST00000536634 PRAMEF25A6NGN4 478 aa7.69□□□□□ -1.18
CLIP1-207ENST00000536634 KRTAP9-7A8MTY7 169 aa7.69□□□□□ -1.18
CLIP1-207ENST00000536634 M0R2C6 588 aa7.69□□□□□ -1.18
CLIP1-207ENST00000536634 NPTXRO95502 500 aa7.69□□□□□ -1.18
CLIP1-207ENST00000536634 MECP2P51608 486 aaKnown RBP7.69□□□□□ -1.18
CLIP1-207ENST00000536634 TCEA2Q15560 299 aa7.69□□□□□ -1.18
CLIP1-207ENST00000536634 RAPGEFL1Q9UHV5 662 aa7.69□□□□□ -1.18
CLIP1-207ENST00000536634 NEXMIFQ5QGS0 1516 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 ADAMTS20P59510 1910 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 CDC45O75419 566 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 IL18BPO95998 194 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 GJA9P57773 515 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 FAM26FQ5R3K3 315 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 TRMT10BQ6PF06 316 aaKnown RBP7.68□□□□□ -1.18
CLIP1-207ENST00000536634 DDX53Q86TM3 631 aaKnown RBP7.68□□□□□ -1.18
CLIP1-207ENST00000536634 SYNPOQ8N3V7 929 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 STPG3Q8N7X2 389 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 C2orf69Q8N8R5 385 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 YTHDC1Q96MU7 727 aaKnown RBP7.68□□□□□ -1.18
CLIP1-207ENST00000536634 WRNIP1Q96S55 665 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 L2HGDHQ9H9P8 463 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 USP40Q9NVE5 1235 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 ARHGAP20Q9P2F6 1191 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 DUSP10Q9Y6W6 482 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 SLIT2O94813 1529 aa7.68□□□□□ -1.18
CLIP1-207ENST00000536634 SLC12A8A0AV02 714 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 ZBTB48P10074 688 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-207ENST00000536634 MC4RP32245 332 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 CTSWP56202 376 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 KRTAP5-3Q6L8H2 238 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 FRMD5Q7Z6J6 570 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 NOP9Q86U38 636 aaKnown RBP7.67□□□□□ -1.18
CLIP1-207ENST00000536634 IGDCC4Q8TDY8 1250 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 DDX1Q92499 740 aaKnown RBP7.67□□□□□ -1.18
CLIP1-207ENST00000536634 TACO1Q9BSH4 297 aaKnown RBP7.67□□□□□ -1.18
CLIP1-207ENST00000536634 KCND1Q9NSA2 647 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 RTEL1Q9NZ71 1219 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 BTBD7Q9P203 1132 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 B3GALT1Q9Y5Z6 326 aa7.67□□□□□ -1.18
CLIP1-207ENST00000536634 FAM83GA6ND36 823 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 RASSF10A6NK89 507 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 B4E1Z4 1266 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 TRAF5O00463 557 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 PRICKLE3O43900 615 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-207ENST00000536634 CYP7B1O75881 506 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 KNG1P01042 644 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 MMEP08473 750 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 JMJD7P0C870 316 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 AOAHP28039 575 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 PIK3R6Q5UE93 754 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 PKN3Q6P5Z2 889 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 OTOP1Q7RTM1 612 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 NUDT10Q8NFP7 164 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 DLG3Q92796 817 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 NUDT11Q96G61 164 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 ARHGAP28Q9P2N2 729 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 CLTCL1P53675 1640 aa7.66□□□□□ -1.18
CLIP1-207ENST00000536634 KRT37O76014 449 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 FBXO21O94952 628 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 HERVK_113P62684 666 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 IRF9Q00978 393 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 SMAD2Q15796 467 aaKnown RBP7.65□□□□□ -1.18
CLIP1-207ENST00000536634 CDCA2Q69YH5 1023 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-207ENST00000536634 LILRA6Q6PI73 481 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 UNC5CLQ8IV45 518 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 CHST14Q8NCH0 376 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 USP32Q8NFA0 1604 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 MBD6Q96DN6 1003 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 KCNH7Q9NS40 1196 aa7.65□□□□□ -1.18
CLIP1-207ENST00000536634 MAGEC2Q9UBF1 373 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-207ENST00000536634 PLCH1Q4KWH8 1693 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 CDC42BPGQ6DT37 1551 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 PRAG1Q86YV5 1406 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms