RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 RNF207Q6ZRF8 634 aa23.35■■□□□ 1.33
TRIM3-214ENST00000536344 CCDC155Q8N6L0 562 aa23.35■■□□□ 1.33
TRIM3-214ENST00000536344 CCDC43Q96MW1 224 aaKnown RBP23.35■■□□□ 1.33
TRIM3-214ENST00000536344 RMDN3Q96TC7 470 aa23.35■■□□□ 1.33
TRIM3-214ENST00000536344 AS3MTQ9HBK9 375 aa23.35■■□□□ 1.33
TRIM3-214ENST00000536344 DOCK1Q14185 1865 aa23.35■■□□□ 1.33
TRIM3-214ENST00000536344 BICDL2A1A5D9 508 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 TMEM150BA6NC51 233 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 EHHADHQ08426 723 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 PTGISQ16647 500 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 CENPPQ6IPU0 288 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 NLRP14Q86W24 1093 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 SFR1Q86XK3 245 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 MYOCDQ8IZQ8 938 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 SLC5A5Q92911 643 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 CLMNQ96JQ2 1002 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 PCMTD1Q96MG8 357 aaPredicted RBP23.34■■□□□ 1.33
TRIM3-214ENST00000536344 MXRA8Q9BRK3 442 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 THAP9Q9H5L6 903 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 PPANQ9NQ55 473 aaKnown RBP23.34■■□□□ 1.33
TRIM3-214ENST00000536344 RABGAP1Q9Y3P9 1069 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 TESPA1A2RU30 521 aaPredicted RBP23.34■■□□□ 1.33
TRIM3-214ENST00000536344 ATP2C2O75185 946 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 GIT2Q14161 759 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 TREML2Q5T2D2 321 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 MLXIPQ9HAP2 919 aa23.34■■□□□ 1.33
TRIM3-214ENST00000536344 COL11A1P12107 1806 aaPredicted RBP23.34■■□□□ 1.33
TRIM3-214ENST00000536344 ATXN2Q99700 1313 aaKnown RBP23.34■■□□□ 1.33
TRIM3-214ENST00000536344 E7EVH7 732 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 TMEM132BQ14DG7 1078 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 KSR1Q8IVT5 923 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 SULF1Q8IWU6 871 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 CCDC65Q8IXS2 484 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 DCPSQ96C86 337 aaKnown RBP23.33■■□□□ 1.33
TRIM3-214ENST00000536344 HSD17B14Q9BPX1 270 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 NOC4LQ9BVI4 516 aaKnown RBP23.33■■□□□ 1.33
TRIM3-214ENST00000536344 HAUS2Q9NVX0 235 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 DNM1LO00429 736 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 ZNF263O14978 683 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 PPP1R37O75864 691 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 PLEKP08567 350 aaPredicted RBP23.33■■□□□ 1.33
TRIM3-214ENST00000536344 SP4Q02446 784 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 KCNA1Q09470 495 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 MMGT1Q8N4V1 131 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 MB21D1Q8N884 522 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 DNAJC7Q99615 494 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 EHMT1Q9H9B1 1298 aa23.33■■□□□ 1.33
TRIM3-214ENST00000536344 TRAF5O00463 557 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 NCK2O43639 380 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 PPP1R12BO60237 982 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 ATP9AO75110 1047 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 CARSP49589 748 aaKnown RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 EPHB4P54760 987 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 ITGB3BPQ13352 177 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 TRADDQ15628 312 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 SUPT20HL1Q3ZLR7 823 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 GUF1Q8N442 669 aaKnown RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 CCDC114Q96M63 670 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 ELP3Q9H9T3 547 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 SNX12Q9UMY4 172 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 GUCY2FP51841 1108 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 TTLL12Q14166 644 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 SYT2Q8N9I0 419 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 SCFD1Q8WVM8 642 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 SGSM3Q96HU1 749 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 NHEJ1Q9H9Q4 299 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 NFU1Q9UMS0 254 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 LGALS16A8MUM7 142 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 MYBP10242 640 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 EEF1GP26641 437 aaKnown RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 HPDP32754 393 aaPredicted RBP23.32■■□□□ 1.32
TRIM3-214ENST00000536344 TBC1D8BQ0IIM8 1120 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 TKFCQ3LXA3 575 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 LRRC27Q9C0I9 530 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 TMOD4Q9NZQ9 345 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 TELO2Q9Y4R8 837 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 PCDHA2Q9Y5H9 948 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 SNCAIPQ9Y6H5 919 aa23.32■■□□□ 1.32
TRIM3-214ENST00000536344 NR1D1P20393 614 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 TRIM14Q14142 442 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 EAPPQ56P03 285 aaPredicted RBP23.31■■□□□ 1.32
TRIM3-214ENST00000536344 ARHGEF16Q5VV41 709 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 CCDC70Q6NSX1 233 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 CYB5D1Q6P9G0 228 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 MCF2L2Q86YR7 1114 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 OTUD5Q96G74 571 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 LXNQ9BS40 222 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 OSBPL7Q9BZF2 842 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 ADARB2Q9NS39 739 aaKnown RBP23.31■■□□□ 1.32
TRIM3-214ENST00000536344 STIM2Q9P246 746 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 TPX2Q9ULW0 747 aaKnown RBP23.31■■□□□ 1.32
TRIM3-214ENST00000536344 AFG3L2Q9Y4W6 797 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 PPP1R12AO14974 1030 aaPredicted RBP23.31■■□□□ 1.32
TRIM3-214ENST00000536344 CLNS1AP54105 237 aaKnown RBP23.31■■□□□ 1.32
TRIM3-214ENST00000536344 MTMR1Q13613 665 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 PGM5Q15124 567 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 KDM7AQ6ZMT4 941 aa23.31■■□□□ 1.32
TRIM3-214ENST00000536344 YTHDF3Q7Z739 585 aaKnown RBP23.31■■□□□ 1.32
TRIM3-214ENST00000536344 FUKQ8N0W3 1084 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms