RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CALCRLQ16602 461 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 PUS10Q3MIT2 529 aaKnown RBP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 SPOUT1Q5T280 376 aaKnown RBP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 FAM228AQ86W67 206 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 ABI1Q8IZP0 508 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 ADAMTS19Q8TE59 1207 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 TCP11Q8WWU5 503 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 LINC01599Q8WXQ3 324 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 HAS1Q92839 578 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 C8orf76Q96K31 380 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 CEP170P1Q96L14 293 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 PPP1R16BQ96T49 567 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 UHRF1Q96T88 793 aaPredicted RBP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 CYP26B1Q9NR63 512 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 SUCLA2Q9P2R7 463 aaPredicted RBP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 VAV3Q9UKW4 847 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 FAM50BQ9Y247 325 aa13.3□□□□□ -0.28
KNTC1-208ENST00000535410 MYH9P35579 1960 aaKnown RBP13.3□□□□□ -0.28
KNTC1-208ENST00000535410 TTC3P53804 2025 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 IGKV6-21A0A0C4DH24 114 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 EML1O00423 815 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 ST18O60284 1047 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 NEMFO60524 1076 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 LARGE1O95461 756 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 EOMESO95936 686 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 BMP1P13497 986 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
KNTC1-208ENST00000535410 POLGP54098 1239 aaPredicted RBP13.29□□□□□ -0.28
KNTC1-208ENST00000535410 ORC2Q13416 577 aaPredicted RBP13.29□□□□□ -0.28
KNTC1-208ENST00000535410 RABEP1Q15276 862 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 NCAPH2Q6IBW4 605 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 ANO5Q75V66 913 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 TNFRSF25Q93038 417 aa13.29□□□□□ -0.28
KNTC1-208ENST00000535410 UNC80Q8N2C7 3258 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 FSD2A1L4K1 749 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 JAK2O60674 1132 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 STBD1O95210 358 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 IBSPP21815 317 aaPredicted RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 YWHABP31946 246 aaKnown RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 TFF2Q03403 129 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 UBE3AQ05086 875 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 NCBP1Q09161 790 aaKnown RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 DSC3Q14574 896 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 PSPC1Q8WXF1 523 aaKnown RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 CCDC43Q96MW1 224 aaKnown RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 LXNQ9BS40 222 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 UBE2ZQ9H832 354 aaPredicted RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 TTC12Q9H892 705 aaPredicted RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 PUF60Q9UHX1 559 aaKnown RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
KNTC1-208ENST00000535410 MRPL42Q9Y6G3 142 aaKnown RBP13.28□□□□□ -0.28
KNTC1-208ENST00000535410 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.27□□□□□ -0.29
KNTC1-208ENST00000535410 A0A0U1RQF3 1178 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 MGEA5O60502 916 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.29
KNTC1-208ENST00000535410 LAG3P18627 525 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 TXKP42681 527 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 MXD4Q14582 209 aaPredicted RBP13.27□□□□□ -0.29
KNTC1-208ENST00000535410 PCBP1Q15365 356 aaKnown RBP eCLIP13.27□□□□□ -0.29
KNTC1-208ENST00000535410 LEXMQ3ZCV2 418 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 C8orf34Q49A92 452 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 PAN2Q504Q3 1202 aaKnown RBP13.27□□□□□ -0.29
KNTC1-208ENST00000535410 XKR9Q5GH70 373 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 PDE12Q6L8Q7 609 aaKnown RBP13.27□□□□□ -0.29
KNTC1-208ENST00000535410 SRGAP1Q7Z6B7 1085 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 ERMNQ8TAM6 284 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 CEP89Q96ST8 783 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 ANKEF1Q9NU02 776 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 NOL7Q9UMY1 257 aaKnown RBP13.27□□□□□ -0.29
KNTC1-208ENST00000535410 PRUNE2Q8WUY3 3088 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 PTPRSQ13332 1948 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 NCOR1O75376 2440 aa13.27□□□□□ -0.29
KNTC1-208ENST00000535410 A0A087WZ62 844 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 GRM6O15303 877 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 SLITRK3O94933 977 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 LYPLA2O95372 231 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 KCNA5P22460 613 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 PPM1AP35813 382 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 TRAPPC10P48553 1259 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 MCM2P49736 904 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 RAB27AP51159 221 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 FOSBP53539 338 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 NPEPPSP55786 919 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 KRT17Q04695 432 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 BMS1Q14692 1282 aaKnown RBP13.26□□□□□ -0.29
KNTC1-208ENST00000535410 TCEAL5Q5H9L2 206 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 EARS2Q5JPH6 523 aaKnown RBP13.26□□□□□ -0.29
KNTC1-208ENST00000535410 CATSPER4Q7RTX7 472 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 ECHDC2Q86YB7 292 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 KLHL23Q8NBE8 558 aa13.26□□□□□ -0.29
KNTC1-208ENST00000535410 FBXO18Q8NFZ0 1043 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms