RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZMAT4Q9H898 229 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 SPTLC3Q9NUV7 552 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 DENND2AQ9ULE3 1009 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 OAZ3Q9UMX2 235 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 IGSF3O75054 1194 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 NFYCQ13952 458 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 KIAA1841Q6NSI8 718 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 ESPNLQ6ZVH7 1005 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 OR14K1Q8NGZ2 314 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 CAAP1Q9H8G2 361 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 USP36Q9P275 1121 aaKnown RBP7.23□□□□□ -1.25
PRKDC-205ENST00000535375 KCNG1Q9UIX4 513 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 ST6GALNAC2Q9UJ37 374 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 MSRAQ9UJ68 235 aa7.23□□□□□ -1.25
PRKDC-205ENST00000535375 ST20-MTHFSA0A0A6YYL1 179 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 TGM5O43548 720 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 ADRB1P08588 477 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 SOX5P35711 763 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 ADCYAP1R1P41586 468 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 ADAM15Q13444 863 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 DHCR24Q15392 516 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 TBR1Q16650 682 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 ATP13A4Q4VNC1 1196 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 HS1BP3Q53T59 392 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 GPR158Q5T848 1215 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 TCTN3Q6NUS6 607 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 BMP8AQ7Z5Y6 402 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 CHAC2Q8WUX2 184 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 GCDHQ92947 438 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-205ENST00000535375 LPPQ93052 612 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 FERMT2Q96AC1 680 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 TTC1Q99614 292 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 GPR20Q99678 358 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 DPYSL5Q9BPU6 564 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
PRKDC-205ENST00000535375 DAPK3O43293 454 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 ZNF623O75123 536 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 ANTXR2P58335 489 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 DDB1Q16531 1140 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 UBR7Q8N806 425 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 ZNF610Q8N9Z0 462 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 WDR92Q96MX6 357 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 MTG2Q9H4K7 406 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 EMC7Q9NPA0 242 aa7.21□□□□□ -1.26
PRKDC-205ENST00000535375 ZFR2Q9UPR6 939 aaKnown RBP7.21□□□□□ -1.26
PRKDC-205ENST00000535375 GOLGA8BA8MQT2 603 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 PATE3B3GLJ2 98 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 MASP1P48740 699 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 PHC1P78364 1004 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 STRN3Q13033 797 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 ICAM4Q14773 271 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 TERF2Q15554 542 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 FRMD7Q6ZUT3 714 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 KANSL1Q7Z3B3 1105 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 RNF180Q86T96 592 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 THNSL2Q86YJ6 484 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 BCL6BQ8N143 479 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-205ENST00000535375 BORCS6Q96GS4 357 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 OR14A2Q96R54 314 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 NOL10Q9BSC4 688 aaKnown RBP7.2□□□□□ -1.26
PRKDC-205ENST00000535375 IFT22Q9H7X7 185 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 POLR3BQ9NW08 1133 aaPredicted RBP7.2□□□□□ -1.26
PRKDC-205ENST00000535375 NOC2LQ9Y3T9 749 aaKnown RBP7.2□□□□□ -1.26
PRKDC-205ENST00000535375 TCAF1Q9Y4C2 921 aa7.2□□□□□ -1.26
PRKDC-205ENST00000535375 ZEB2O60315 1214 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 RPS19P39019 145 aaKnown RBP7.19□□□□□ -1.26
PRKDC-205ENST00000535375 STAT3P40763 770 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 ADAM17P78536 824 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 BROXQ5VW32 411 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 UNQ6494/PRO21346Q6UXR6 183 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 DNERQ8NFT8 737 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 SLC5A5Q92911 643 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 DVL3Q92997 716 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-205ENST00000535375 ZNF496Q96IT1 587 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-205ENST00000535375 HIST1H2AHQ96KK5 128 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 CDK5RAP1Q96SZ6 601 aaKnown RBP7.19□□□□□ -1.26
PRKDC-205ENST00000535375 HIST1H2AJQ99878 128 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 MSL2Q9HCI7 577 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 DNAI1Q9UI46 699 aa7.19□□□□□ -1.26
PRKDC-205ENST00000535375 CTDP1Q9Y5B0 961 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-205ENST00000535375 RBM8AQ9Y5S9 174 aaKnown RBP7.19□□□□□ -1.26
PRKDC-205ENST00000535375 A0A0A6YYJ9 748 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 MATN2O00339 956 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 SLC26A4O43511 780 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 FOXS1O43638 330 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 OPHN1O60890 802 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 PCDH8O95206 1070 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 CPEP16870 476 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 ZNF20P17024 532 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 CNGA1P29973 690 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 ATP2C1P98194 919 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-205ENST00000535375 MAN2A1Q16706 1144 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 ZNF585AQ6P3V2 769 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 Q8TCH9 128 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 SLC7A6OSQ96CW6 309 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-205ENST00000535375 PLA2G12BQ9BX93 195 aa7.18□□□□□ -1.26
PRKDC-205ENST00000535375 PITHD1Q9GZP4 211 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-205ENST00000535375 KLC2Q9H0B6 622 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms