RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 KIAA1755Q5JYT7 1200 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 CATSPER3Q86XQ3 398 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 LINC00116Q8NCU8 138 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 BTBD6Q96KE9 485 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 C8orf37Q96NL8 207 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 HOMER3Q9NSC5 361 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 FTLP02792 175 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-232ENST00000535094 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
MCF2L-232ENST00000535094 C1orf54Q8WWF1 131 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 SYN2Q92777 582 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-232ENST00000535094 STMN4Q9H169 189 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-232ENST00000535094 LRRC4CQ9HCJ2 640 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 PAX7P23759 505 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 PSMC2P35998 433 aaKnown RBP17.18■□□□□ 0.34
MCF2L-232ENST00000535094 TNIP1Q15025 636 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 CLEC4GQ6UXB4 293 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 IRF2BP2Q7Z5L9 587 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 ERP44Q9BS26 406 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 NKIRAS1Q9NYS0 192 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 TNS2Q63HR2 1409 aa17.18■□□□□ 0.34
MCF2L-232ENST00000535094 DIAPH2O60879 1101 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 GDF11O95390 407 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 KRT5P13647 590 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 TNFRSF8P28908 595 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 ARHGAP4P98171 946 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 MYL7Q01449 175 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 SLFN13Q68D06 897 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 CCDC137Q6PK04 289 aaKnown RBP17.17■□□□□ 0.34
MCF2L-232ENST00000535094 ACTRT1Q8TDG2 376 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 NSMCE1Q8WV22 266 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 USTQ9Y2C2 406 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-232ENST00000535094 ZBTB5O15062 677 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 EIF3BP55884 814 aaKnown RBP17.17■□□□□ 0.34
MCF2L-232ENST00000535094 COG2Q14746 738 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 C16orf86Q6ZW13 317 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 MREGQ8N565 214 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 TAS2R14Q9NYV8 317 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 ZBTB39O15060 712 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 SESN3P58005 492 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 SEPT2Q15019 361 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 INTS8Q75QN2 995 aaKnown RBP17.17■□□□□ 0.34
MCF2L-232ENST00000535094 CYP2W1Q8TAV3 490 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 RFFLQ8WZ73 363 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 GANQ9H2C0 597 aa17.17■□□□□ 0.34
MCF2L-232ENST00000535094 GOLGA8IPA6NC78 632 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 GOLGA8JA6NMD2 632 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 THAP12O43422 761 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 GCLMP48507 274 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 BYSLQ13895 437 aaKnown RBP17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ACCSLQ4AC99 568 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 AGBL2Q5U5Z8 902 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 CD302Q8IX05 232 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ARHGEF2Q92974 986 aaKnown RBP17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ARHGEF26Q96DR7 871 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ALG6Q9Y672 507 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 H0Y3Z8 333 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ADCY8P40145 1251 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 SEPT14Q6ZU15 432 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 NT5DC3Q86UY8 548 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 SRRM1Q8IYB3 904 aaKnown RBP17.16■□□□□ 0.34
MCF2L-232ENST00000535094 SCFD2Q8WU76 684 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 PRCCQ92733 491 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ZC3H12CQ9C0D7 883 aaKnown RBP17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ECT2Q9H8V3 914 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ABCF3Q9NUQ8 709 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 SUN1O94901 812 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ATP11AP98196 1134 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 TRPM8Q7Z2W7 1104 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 TATDN2Q93075 761 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 CALR3Q96L12 384 aaKnown RBP17.16■□□□□ 0.34
MCF2L-232ENST00000535094 HEMGNQ9BXL5 484 aa17.16■□□□□ 0.34
MCF2L-232ENST00000535094 GCFC2P16383 781 aaKnown RBP17.15■□□□□ 0.34
MCF2L-232ENST00000535094 PCK1P35558 622 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 SOX5P35711 763 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 ZNF543Q08ER8 600 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 SLFN12Q8IYM2 578 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 ZNF622Q969S3 477 aaKnown RBP eCLIP17.15■□□□□ 0.34
MCF2L-232ENST00000535094 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 ERVK-5Q9HDB9 667 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 AJAP1Q9UKB5 411 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-232ENST00000535094 UBOX5O94941 541 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 DLATP10515 647 aaKnown RBP17.15■□□□□ 0.34
MCF2L-232ENST00000535094 ZNF449Q6P9G9 518 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 BARGINQ6ZT62 677 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 ZNF572Q7Z3I7 529 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-232ENST00000535094 FRMD5Q7Z6J6 570 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 ACP6Q9NPH0 428 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 SUCLA2Q9P2R7 463 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-232ENST00000535094 ABCB11O95342 1321 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 BCRP11274 1271 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 MARCKSL1P49006 195 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 PLCB3Q01970 1234 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 C6orf118Q5T5N4 469 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 STXBP4Q6ZWJ1 553 aa17.15■□□□□ 0.34
MCF2L-232ENST00000535094 ARHGEF35A5YM69 484 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 MYBL1P10243 752 aa17.14■□□□□ 0.34
MCF2L-232ENST00000535094 GPSM2P81274 684 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms