RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 RTP2Q5QGT7 225 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 ANGEL2Q5VTE6 544 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 CWF19L1Q69YN2 538 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 STRA8Q7Z7C7 330 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 TSPYL5Q86VY4 417 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 AFAP1L2Q8N4X5 818 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 FAM181AQ8N9Y4 354 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 DCAF4Q8WV16 495 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 TIFAQ96CG3 184 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 PAK6Q9NQU5 681 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 KLHL42Q9P2K6 505 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 PLAGL2Q9UPG8 496 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 SCAF8Q9UPN6 1271 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 BACE2Q9Y5Z0 518 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 CEP250Q9BV73 2442 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 PFASO15067 1338 aa5.96□□□□□ -1.46
ECHDC1-223ENST00000534442 LTBP2Q14767 1821 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 A0A0G2JMZ2 1700 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 ZNF205O95201 554 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 CRTAMO95727 393 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 ASLP04424 464 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 ITGB2P05107 769 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 ZBTB48P10074 688 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 NFKB2Q00653 900 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 DMWDQ09019 674 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 TESK1Q15569 626 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 GAB4Q2WGN9 574 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 ACBD5Q5T8D3 534 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 CDKAL1Q5VV42 579 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 CCDC103Q8IW40 242 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 SPACA3Q8IXA5 215 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 TPSG1Q9NRR2 321 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 GPATCH2Q9NW75 528 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 RNF112Q9ULX5 631 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 NPFFR2Q9Y5X5 522 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 MYPNQ86TC9 1320 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 ADGRA2Q96PE1 1338 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 LOC400499M0QZD8 3231 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 TEX15Q9BXT5 2789 aa5.95□□□□□ -1.46
ECHDC1-223ENST00000534442 TENM4Q6N022 2769 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 EYA4O95677 639 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 PDGFRBP09619 1106 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 PLS3P13797 630 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 CTGFP29279 349 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 NOP2P46087 812 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 GSK3AP49840 483 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 NFIAQ12857 509 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 LRRC26Q2I0M4 334 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 DUSP27Q5VZP5 1158 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 RCSD1Q6JBY9 416 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 PPIL6Q8IXY8 311 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 TMEFF1Q8IYR6 380 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 SPATA18Q8TC71 538 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 LEO1Q8WVC0 666 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 DPF2Q92785 391 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 WNK4Q96J92 1243 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 MAGEB10Q96LZ2 347 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 HSPA12BQ96MM6 686 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 PHF20Q9BVI0 1012 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 IRF2BPLQ9H1B7 796 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 MKNK2Q9HBH9 465 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 ALG13Q9NP73 1137 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 SEMA3GQ9NS98 782 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 TYW1Q9NV66 732 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 CLEC1BQ9P126 229 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 PCDHA9Q9Y5H5 950 aa5.94□□□□□ -1.46
ECHDC1-223ENST00000534442 ROCK1Q13464 1354 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 MYO9AB2RTY4 2548 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 WDR64B1ANS9 1081 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 H0Y858 1186 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 H3BS24 57 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 MEFVO15553 781 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 OPA1O60313 960 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 MSCO60682 206 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 SYPP08247 313 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 U2AF1L5P0DN76 240 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 TPP2P29144 1249 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 ALDH1B1P30837 517 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 IGFALSP35858 605 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 U2AF1Q01081 240 aaKnown RBP eCLIP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 SEPT7Q16181 437 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 CT47A1Q5JQC4 288 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 PKN3Q6P5Z2 889 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 ABHD17CQ6PCB6 329 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 RSPO2Q6UXX9 243 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 PPM1KQ8N3J5 372 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 SHKBP1Q8TBC3 707 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 DBNDD2Q9BQY9 259 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 FSD1Q9BTV5 496 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 FOXP3Q9BZS1 431 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 TRIT1Q9H3H1 467 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 METTL14Q9HCE5 456 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 TLR9Q9NR96 1032 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 ZSWIM5Q9P217 1185 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 COG5Q9UP83 839 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 JAG2Q9Y219 1238 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 PCDHA8Q9Y5H6 950 aa5.93□□□□□ -1.46
ECHDC1-223ENST00000534442 CFAP46Q8IYW2 2715 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 PIEZO2Q9H5I5 2752 aa5.92□□□□□ -1.46
ECHDC1-223ENST00000534442 EP300Q09472 2414 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms