RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 SLC7A3Q8WY07 619 aa23.85■■□□□ 1.41
PKP3-211ENST00000534401 XPNPEP1Q9NQW7 623 aa23.85■■□□□ 1.41
PKP3-211ENST00000534401 SUCLA2Q9P2R7 463 aaPredicted RBP23.85■■□□□ 1.41
PKP3-211ENST00000534401 DBR1Q9UK59 544 aaKnown RBP23.85■■□□□ 1.41
PKP3-211ENST00000534401 LCHNA4D1U4 455 aa23.84■■□□□ 1.41
PKP3-211ENST00000534401 MGEA5O60502 916 aa23.84■■□□□ 1.41
PKP3-211ENST00000534401 FAM189BP81408 668 aa23.84■■□□□ 1.41
PKP3-211ENST00000534401 PPP2R2DQ66LE6 453 aa23.84■■□□□ 1.41
PKP3-211ENST00000534401 ZBED2Q9BTP6 218 aa23.84■■□□□ 1.41
PKP3-211ENST00000534401 GINS2Q9Y248 185 aa23.84■■□□□ 1.41
PKP3-211ENST00000534401 COL6A3P12111 3177 aa23.84■■□□□ 1.41
PKP3-211ENST00000534401 ARL6IP4Q66PJ3 421 aaKnown RBP23.83■■□□□ 1.41
PKP3-211ENST00000534401 ERMNQ8TAM6 284 aa23.83■■□□□ 1.41
PKP3-211ENST00000534401 ZNF689Q96CS4 500 aaPredicted RBP23.83■■□□□ 1.41
PKP3-211ENST00000534401 NACC1Q96RE7 527 aa23.83■■□□□ 1.41
PKP3-211ENST00000534401 RGS18Q9NS28 235 aa23.83■■□□□ 1.41
PKP3-211ENST00000534401 STK24Q9Y6E0 443 aa23.83■■□□□ 1.41
PKP3-211ENST00000534401 POLGP54098 1239 aaPredicted RBP23.82■■□□□ 1.4
PKP3-211ENST00000534401 EMC2Q15006 297 aa23.82■■□□□ 1.4
PKP3-211ENST00000534401 PIGOQ8TEQ8 1089 aa23.82■■□□□ 1.4
PKP3-211ENST00000534401 PPP1R16BQ96T49 567 aa23.82■■□□□ 1.4
PKP3-211ENST00000534401 IFT122Q9HBG6 1241 aa23.82■■□□□ 1.4
PKP3-211ENST00000534401 LRWD1Q9UFC0 647 aa23.82■■□□□ 1.4
PKP3-211ENST00000534401 LINC01553A4QN01 128 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 C9IYK1 514 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 ASAP2O43150 1006 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 DGAT1O75907 488 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 POU3F3P20264 500 aaPredicted RBP23.81■■□□□ 1.4
PKP3-211ENST00000534401 ERVK-21P61565 698 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 POU5F1BQ06416 359 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 NFX1Q12986 1120 aaKnown RBP23.81■■□□□ 1.4
PKP3-211ENST00000534401 RESTQ13127 1097 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 ECM1Q16610 540 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 DTHD1Q6ZMT9 781 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 TCP11Q8WWU5 503 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 PRPF31Q8WWY3 499 aaKnown RBP23.81■■□□□ 1.4
PKP3-211ENST00000534401 MYLIPQ8WY64 445 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 MMTAG2Q9BU76 263 aaKnown RBP23.81■■□□□ 1.4
PKP3-211ENST00000534401 GCOM2Q9BZD3 368 aaPredicted RBP23.81■■□□□ 1.4
PKP3-211ENST00000534401 RAB34Q9BZG1 259 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 MTMR6Q9Y217 621 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 COL4A3BPQ9Y5P4 624 aa23.81■■□□□ 1.4
PKP3-211ENST00000534401 A0A087WZ62 844 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 DGKIO75912 1065 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 ARL2P36404 184 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 SARSP49591 514 aaKnown RBP23.8■■□□□ 1.4
PKP3-211ENST00000534401 HAUS3Q68CZ6 603 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 FAM117BQ6P1L5 589 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 FERMT3Q86UX7 667 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 RHPN2Q8IUC4 686 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 NPAS4Q8IUM7 802 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 PSPC1Q8WXF1 523 aaKnown RBP23.8■■□□□ 1.4
PKP3-211ENST00000534401 TMEM143Q96AN5 459 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 ADAM2Q99965 735 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 FDXACB1Q9BRP7 624 aaPredicted RBP23.8■■□□□ 1.4
PKP3-211ENST00000534401 PRDM12Q9H4Q4 367 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 C1orf112Q9NSG2 853 aa23.8■■□□□ 1.4
PKP3-211ENST00000534401 A0A087WWV3 80 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 VPS37CA5D8V6 355 aaPredicted RBP23.79■■□□□ 1.4
PKP3-211ENST00000534401 LINC00271P0C7V0 271 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 LAMTOR4Q0VGL1 99 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 HYIQ5T013 277 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 POTEGQ6S5H5 508 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 SLC24A5Q71RS6 500 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 SPRED2Q7Z698 418 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 IFNLR1Q8IU57 520 aaPredicted RBP23.79■■□□□ 1.4
PKP3-211ENST00000534401 KSR1Q8IVT5 923 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 NLRP7Q8WX94 980 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 ZNF668Q96K58 619 aaPredicted RBP23.79■■□□□ 1.4
PKP3-211ENST00000534401 MTRQ99707 1265 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 TRAIPQ9BWF2 469 aa23.79■■□□□ 1.4
PKP3-211ENST00000534401 INO80BQ9C086 356 aaPredicted RBP23.79■■□□□ 1.4
PKP3-211ENST00000534401 UPP2O95045 317 aa23.78■■□□□ 1.4
PKP3-211ENST00000534401 BMP15O95972 392 aa23.78■■□□□ 1.4
PKP3-211ENST00000534401 CCT6AP40227 531 aaKnown RBP23.78■■□□□ 1.4
PKP3-211ENST00000534401 ADGRE1Q14246 886 aa23.78■■□□□ 1.4
PKP3-211ENST00000534401 HSCBQ8IWL3 235 aa23.78■■□□□ 1.4
PKP3-211ENST00000534401 KCTD17Q8N5Z5 321 aa23.78■■□□□ 1.4
PKP3-211ENST00000534401 ELAC1Q9H777 363 aaKnown RBP23.78■■□□□ 1.4
PKP3-211ENST00000534401 ATP6V0A4Q9HBG4 840 aa23.78■■□□□ 1.4
PKP3-211ENST00000534401 MORC2Q9Y6X9 1032 aaPredicted RBP23.78■■□□□ 1.4
PKP3-211ENST00000534401 EPOPA6NHQ4 379 aa23.77■■□□□ 1.4
PKP3-211ENST00000534401 STX6O43752 255 aa23.77■■□□□ 1.4
PKP3-211ENST00000534401 MXD4Q14582 209 aaPredicted RBP23.77■■□□□ 1.4
PKP3-211ENST00000534401 SRGAP1Q7Z6B7 1085 aa23.77■■□□□ 1.4
PKP3-211ENST00000534401 TGS1Q96RS0 853 aaKnown RBP23.77■■□□□ 1.4
PKP3-211ENST00000534401 CHST12Q9NRB3 414 aa23.77■■□□□ 1.4
PKP3-211ENST00000534401 RALGAPA2Q2PPJ7 1873 aa23.77■■□□□ 1.4
PKP3-211ENST00000534401 FNDC1Q4ZHG4 1894 aaPredicted RBP23.77■■□□□ 1.4
PKP3-211ENST00000534401 PP2D1A8MPX8 630 aa23.76■■□□□ 1.39
PKP3-211ENST00000534401 STAG3L1P0CL83 205 aa23.76■■□□□ 1.39
PKP3-211ENST00000534401 PTPAQ15257 358 aa23.76■■□□□ 1.39
PKP3-211ENST00000534401 CLP1Q92989 425 aaKnown RBP23.76■■□□□ 1.39
PKP3-211ENST00000534401 YME1L1Q96TA2 773 aa23.76■■□□□ 1.39
PKP3-211ENST00000534401 NFKBIZQ9BYH8 718 aa23.76■■□□□ 1.39
PKP3-211ENST00000534401 RNF216Q9NWF9 866 aaPredicted RBP23.76■■□□□ 1.39
PKP3-211ENST00000534401 NLRC5Q86WI3 1866 aa23.76■■□□□ 1.39
PKP3-211ENST00000534401 PRRC2BQ5JSZ5 2229 aaKnown RBP23.76■■□□□ 1.39
PKP3-211ENST00000534401 SLC26A4O43511 780 aa23.75■■□□□ 1.39
PKP3-211ENST00000534401 LPXNO60711 386 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms