RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 OXER1Q8TDS5 423 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 PPP1R16BQ96T49 567 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 GCOM2Q9BZD3 368 aaPredicted RBP15.04■□□□□ -0
CAPN1-228ENST00000534373 INO80BQ9C086 356 aaPredicted RBP15.04■□□□□ -0
CAPN1-228ENST00000534373 CHST12Q9NRB3 414 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 VAV3Q9UKW4 847 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 FAM50BQ9Y247 325 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 PCDHB12Q9Y5F1 795 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 BRWD1Q9NSI6 2320 aa15.04■□□□□ -0
CAPN1-228ENST00000534373 MARCH6O60337 910 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 EOMESO95936 686 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 ITGB1P05556 798 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 EPHA7Q15375 998 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 CTC1Q2NKJ3 1217 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 PAN2Q504Q3 1202 aaKnown RBP15.03■□□□□ -0
CAPN1-228ENST00000534373 FAM102BQ5T8I3 360 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 ANO5Q75V66 913 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 ZNF410Q86VK4 478 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 C4orf19Q8IY42 314 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 NECAB1Q8N987 351 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 KLHL23Q8NBE8 558 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 NSUN7Q8NE18 718 aaKnown RBP15.03■□□□□ -0
CAPN1-228ENST00000534373 NLRP7Q8WX94 980 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 RSPH1Q8WYR4 309 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 HAS1Q92839 578 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 TNFRSF25Q93038 417 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 NECAB3Q96P71 396 aaPredicted RBP15.03■□□□□ -0
CAPN1-228ENST00000534373 ALG13Q9NP73 1137 aaKnown RBP15.03■□□□□ -0
CAPN1-228ENST00000534373 GJB4Q9NTQ9 266 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 DACT1Q9NYF0 836 aa15.03■□□□□ -0
CAPN1-228ENST00000534373 A0A0U1RQF3 1178 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 GRXCR2A6NFK2 248 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 TBKBP1A7MCY6 615 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 EML1O00423 815 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 CAMK1Q14012 370 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 TRIM29Q14134 588 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 PTCRAQ6ISU1 281 aaPredicted RBP15.02■□□□□ -0
CAPN1-228ENST00000534373 OTUD6AQ7L8S5 288 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 SCLT1Q96NL6 688 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 TRAIPQ9BWF2 469 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 TMEM117Q9H0C3 514 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 CYP26B1Q9NR63 512 aa15.02■□□□□ -0
CAPN1-228ENST00000534373 SUCLA2Q9P2R7 463 aaPredicted RBP15.02■□□□□ -0
CAPN1-228ENST00000534373 BDP1A6H8Y1 2624 aa15.02□□□□□ -0.01
CAPN1-228ENST00000534373 LARGE1O95461 756 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 GATMP50440 423 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 HYAL1Q12794 435 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 NR5A1Q13285 461 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 DRP2Q13474 957 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 EARS2Q5JPH6 523 aaKnown RBP15.01□□□□□ -0.01
CAPN1-228ENST00000534373 SPOUT1Q5T280 376 aaKnown RBP15.01□□□□□ -0.01
CAPN1-228ENST00000534373 PDE12Q6L8Q7 609 aaKnown RBP15.01□□□□□ -0.01
CAPN1-228ENST00000534373 ECHDC2Q86YB7 292 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 FAM178BQ8IXR5 827 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 POF1BQ8WVV4 589 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 SLC7A3Q8WY07 619 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 C1QTNF1Q9BXJ1 281 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 ZSWIM4Q9H7M6 989 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 TYW1Q9NV66 732 aaKnown RBP15.01□□□□□ -0.01
CAPN1-228ENST00000534373 CLDND1Q9NY35 253 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 LIMCH1Q9UPQ0 1083 aa15.01□□□□□ -0.01
CAPN1-228ENST00000534373 FSD2A1L4K1 749 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 GAS2O43903 313 aaKnown RBP15□□□□□ -0.01
CAPN1-228ENST00000534373 SEC24BO95487 1268 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 SKIP12755 728 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 LAG3P18627 525 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 SFPQP23246 707 aaKnown RBP eCLIP15□□□□□ -0.01
CAPN1-228ENST00000534373 DNAJB1P25685 340 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 LTBRP36941 435 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 RFC5P40937 340 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 SPIRE1Q08AE8 756 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 ADAM15Q13444 863 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 POTEDQ86YR6 584 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 ABI1Q8IZP0 508 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 CEP170P1Q96L14 293 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 CASD1Q96PB1 797 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 DHX33Q9H6R0 707 aaKnown RBP15□□□□□ -0.01
CAPN1-228ENST00000534373 CWH43Q9H720 699 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 PRKAG3Q9UGI9 489 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 PCDHA12Q9UN75 941 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 LZTS1Q9Y250 596 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 MYO7AQ13402 2215 aa15□□□□□ -0.01
CAPN1-228ENST00000534373 FNDC1Q4ZHG4 1894 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 A0A087WZ62 844 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 CARNS1A5YM72 827 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 TMEM150BA6NC51 233 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 BTBD18B2RXH4 712 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 H3BQ06 376 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 ASAP2O43150 1006 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 FGFR1P11362 822 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 IBSPP21815 317 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 YWHABP31946 246 aaKnown RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 PLCB3Q01970 1234 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 EP400NLQ6ZTU2 488 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 ZNF598Q86UK7 904 aaKnown RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 RHPN2Q8IUC4 686 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 DIS3L2Q8IYB7 885 aaKnown RBP14.99□□□□□ -0.01
CAPN1-228ENST00000534373 LRRC43Q8N309 656 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 COLGALT1Q8NBJ5 622 aa14.99□□□□□ -0.01
CAPN1-228ENST00000534373 ZNF668Q96K58 619 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms