RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	MIER3	Q7Z3K6	550 aa		27.33	■■□□□ 1.97
RELA-223	ENST00000534283	ZNF668	Q96K58	619 aa	Predicted RBP	27.33	■■□□□ 1.97
RELA-223	ENST00000534283	CASD1	Q96PB1	797 aa		27.33	■■□□□ 1.97
RELA-223	ENST00000534283	PHF20	Q9BVI0	1012 aa		27.33	■■□□□ 1.97
RELA-223	ENST00000534283	KCNJ14	Q9UNX9	436 aa		27.33	■■□□□ 1.97
RELA-223	ENST00000534283	PCDHB12	Q9Y5F1	795 aa		27.33	■■□□□ 1.97
RELA-223	ENST00000534283	TMEM150B	A6NC51	233 aa		27.32	■■□□□ 1.96
RELA-223	ENST00000534283	TBC1D8B	Q0IIM8	1120 aa		27.32	■■□□□ 1.96
RELA-223	ENST00000534283	SMAD4	Q13485	552 aa	Known RBP	27.32	■■□□□ 1.96
RELA-223	ENST00000534283	NONO	Q15233	471 aa	Known RBP eCLIP	27.32	■■□□□ 1.96
RELA-223	ENST00000534283	COLGALT1	Q8NBJ5	622 aa		27.32	■■□□□ 1.96
RELA-223	ENST00000534283	TMEM117	Q9H0C3	514 aa		27.32	■■□□□ 1.96
RELA-223	ENST00000534283	AAAS	Q9NRG9	546 aa		27.32	■■□□□ 1.96
RELA-223	ENST00000534283	SLC37A4	O43826	429 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	FGF18	O76093	207 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	EYA4	O95677	639 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	INF2	Q27J81	1249 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	KRT25	Q7Z3Z0	450 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	ECHDC2	Q86YB7	292 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	PPP2R3C	Q969Q6	453 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	DDX25	Q9UHL0	483 aa	Known RBP	27.31	■■□□□ 1.96
RELA-223	ENST00000534283	CD207	Q9UJ71	328 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	TPCN1	Q9ULQ1	816 aa		27.31	■■□□□ 1.96
RELA-223	ENST00000534283	GLP2R	O95838	553 aa		27.3	■■□□□ 1.96
RELA-223	ENST00000534283	NRIP1	P48552	1158 aa		27.3	■■□□□ 1.96
RELA-223	ENST00000534283	ERVFC1	P60507	584 aa		27.3	■■□□□ 1.96
RELA-223	ENST00000534283	SPOUT1	Q5T280	376 aa	Known RBP	27.3	■■□□□ 1.96
RELA-223	ENST00000534283	EML1	O00423	815 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	FSCN2	O14926	492 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	PFKFB2	O60825	505 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	ALAD	P13716	330 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	ZSCAN20	P17040	1043 aa	Predicted RBP	27.29	■■□□□ 1.96
RELA-223	ENST00000534283	FGFR4	P22455	802 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	CSPP1	Q1MSJ5	1256 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	MTERF2	Q49AM1	385 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	RBM23	Q86U06	439 aa	Known RBP	27.29	■■□□□ 1.96
RELA-223	ENST00000534283	ZNF598	Q86UK7	904 aa	Known RBP	27.29	■■□□□ 1.96
RELA-223	ENST00000534283	KCNMB3	Q9NPA1	279 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	GJB4	Q9NTQ9	266 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	VAV3	Q9UKW4	847 aa		27.29	■■□□□ 1.96
RELA-223	ENST00000534283	STK36	Q9NRP7	1315 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283		A0A0U1RQF3	1178 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	DTNB	O60941	627 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	CTDNEP1	O95476	244 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	LAG3	P18627	525 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	NDUFV1	P49821	464 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	PLCB3	Q01970	1234 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	COASY	Q13057	564 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	CLLU1OS	Q5K130	101 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	PPP4R3A	Q6IN85	833 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	ANO5	Q75V66	913 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	SH2D3A	Q9BRG2	576 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	TLR9	Q9NR96	1032 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	SEPT9	Q9UHD8	586 aa	Predicted RBP	27.28	■■□□□ 1.96
RELA-223	ENST00000534283	LZTS1	Q9Y250	596 aa		27.28	■■□□□ 1.96
RELA-223	ENST00000534283	ARIH1	Q9Y4X5	557 aa	Predicted RBP	27.28	■■□□□ 1.96
RELA-223	ENST00000534283	HOXA2	O43364	376 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	CSDE1	O75534	798 aa	Known RBP	27.27	■■□□□ 1.96
RELA-223	ENST00000534283	CDKL5	O76039	1030 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	ATF7	P17544	494 aa	Predicted RBP	27.27	■■□□□ 1.96
RELA-223	ENST00000534283	CDC42EP1	Q00587	391 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	PPP2R5C	Q13362	524 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	LETM2	Q2VYF4	491 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	THNSL1	Q8IYQ7	743 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	SMRP1	Q8NCR6	262 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	VN1R2	Q8NFZ6	395 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	OXER1	Q8TDS5	423 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	NLRP7	Q8WX94	980 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	SLK	Q9H2G2	1235 aa	Predicted RBP	27.27	■■□□□ 1.96
RELA-223	ENST00000534283	TLE6	Q9H808	572 aa		27.27	■■□□□ 1.96
RELA-223	ENST00000534283	ATG2A	Q2TAZ0	1938 aa		27.26	■■□□□ 1.95
RELA-223	ENST00000534283	DDX11L8	A8MPP1	907 aa		27.26	■■□□□ 1.95
RELA-223	ENST00000534283	PER2	O15055	1255 aa		27.26	■■□□□ 1.95
RELA-223	ENST00000534283	DCX	O43602	365 aa		27.26	■■□□□ 1.95
RELA-223	ENST00000534283	MAF	O75444	373 aa	Predicted RBP	27.26	■■□□□ 1.95
RELA-223	ENST00000534283	PLA2G5	P39877	138 aa		27.26	■■□□□ 1.95
RELA-223	ENST00000534283	PSMC5	P62195	406 aa		27.26	■■□□□ 1.95
RELA-223	ENST00000534283	MICAL1	Q8TDZ2	1067 aa		27.26	■■□□□ 1.95
RELA-223	ENST00000534283	FAM20A	Q96MK3	541 aa		27.26	■■□□□ 1.95
RELA-223	ENST00000534283	PRR33	A8MZF0	331 aa		27.25	■■□□□ 1.95
RELA-223	ENST00000534283	EOMES	O95936	686 aa		27.25	■■□□□ 1.95
RELA-223	ENST00000534283	DUSP6	Q16828	381 aa		27.25	■■□□□ 1.95
RELA-223	ENST00000534283	PDE12	Q6L8Q7	609 aa	Known RBP	27.25	■■□□□ 1.95
RELA-223	ENST00000534283	KCNT2	Q6UVM3	1135 aa		27.25	■■□□□ 1.95
RELA-223	ENST00000534283	MRPS27	Q92552	414 aa	Known RBP	27.25	■■□□□ 1.95
RELA-223	ENST00000534283	HAS1	Q92839	578 aa		27.25	■■□□□ 1.95
RELA-223	ENST00000534283	TRAIP	Q9BWF2	469 aa		27.25	■■□□□ 1.95
RELA-223	ENST00000534283	GCOM2	Q9BZD3	368 aa	Predicted RBP	27.25	■■□□□ 1.95
RELA-223	ENST00000534283	SUCLA2	Q9P2R7	463 aa	Predicted RBP	27.25	■■□□□ 1.95
RELA-223	ENST00000534283		A0A087WZ62	844 aa		27.24	■■□□□ 1.95
RELA-223	ENST00000534283	ANAPC15	P60006	121 aa		27.24	■■□□□ 1.95
RELA-223	ENST00000534283	RBM10	P98175	930 aa	Known RBP	27.24	■■□□□ 1.95
RELA-223	ENST00000534283	KCNC3	Q14003	757 aa		27.24	■■□□□ 1.95
RELA-223	ENST00000534283	EARS2	Q5JPH6	523 aa	Known RBP	27.24	■■□□□ 1.95
RELA-223	ENST00000534283	NEK8	Q86SG6	692 aa		27.24	■■□□□ 1.95
RELA-223	ENST00000534283	LRRC43	Q8N309	656 aa		27.24	■■□□□ 1.95
RELA-223	ENST00000534283	SCLT1	Q96NL6	688 aa		27.24	■■□□□ 1.95
RELA-223	ENST00000534283	FDXACB1	Q9BRP7	624 aa	Predicted RBP	27.24	■■□□□ 1.95
RELA-223	ENST00000534283	CHST12	Q9NRB3	414 aa		27.24	■■□□□ 1.95
RELA-223	ENST00000534283	WRAP73	Q9P2S5	460 aa	Predicted RBP	27.24	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms