RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 PANK4Q9NVE7 773 aa11.15□□□□□ -0.62
LDLRAD3-206ENST00000534091 WRAP73Q9P2S5 460 aaPredicted RBP11.15□□□□□ -0.62
LDLRAD3-206ENST00000534091 ODF2LQ9ULJ1 636 aa11.15□□□□□ -0.62
LDLRAD3-206ENST00000534091 TRIOBPQ9H2D6 2365 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 GRIN2DO15399 1336 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 IGKV6D-21A0A0A0MT36 114 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 BICDL2A1A5D9 508 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 F2P00734 622 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 SSBP05455 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 PFKMP08237 780 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 MYL3P08590 195 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 GAP43P17677 238 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZNF75DP51815 510 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 ACTR2P61160 394 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 STK4Q13043 487 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 FAM26FQ5R3K3 315 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 TMEM63BQ5T3F8 832 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 MIS18BP1Q6P0N0 1132 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 ABHD15Q6UXT9 468 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 SMYD4Q8IYR2 804 aaPredicted RBP11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 BANK1Q8NDB2 785 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 AFG1LQ8WV93 481 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 NELFBQ8WX92 580 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 COPS5Q92905 334 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 BADQ92934 168 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 RUSC1Q9BVN2 902 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 TIPINQ9BVW5 301 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 MLXIPQ9HAP2 919 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 NFE2L3Q9Y4A8 694 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 SAMM50Q9Y512 469 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 PCDHA2Q9Y5H9 948 aa11.14□□□□□ -0.63
LDLRAD3-206ENST00000534091 ARHGEF35A5YM69 484 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 HAS3O00219 553 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 KIF20AO95235 890 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 GGPS1O95749 300 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 KRT18P05783 430 aaKnown RBP11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 IDEP14735 1019 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 CCNE1P24864 410 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 YWHABP31946 246 aaKnown RBP11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 RFC2P35250 354 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 RARRES1P49788 294 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZNF131P52739 623 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 SP2Q02086 613 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 SPAG1Q07617 926 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 RBL2Q08999 1139 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 NBPF20Q3BBV1 942 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 CDKAL1Q5VV42 579 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 CENPPQ6IPU0 288 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 KLHL10Q6JEL2 608 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 PSRC1Q6PGN9 363 aaPredicted RBP11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 PIGOQ8TEQ8 1089 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 SPATA33Q96N06 139 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 REEP2Q9BRK0 252 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 TRIM5Q9C035 493 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 MTIF3Q9H2K0 278 aaKnown RBP11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 HIPK3Q9H422 1215 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 OLFML3Q9NRN5 406 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 SEL1LQ9UBV2 794 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 COL4A3BPQ9Y5P4 624 aa11.13□□□□□ -0.63
LDLRAD3-206ENST00000534091 UBE4BO95155 1302 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 SIP14410 1827 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 NOP56O00567 594 aaKnown RBP11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 B4GALT4O60513 344 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 TBCAO75347 108 aaKnown RBP11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 STBD1O95210 358 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 LRRC63Q05C16 580 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 BFSP2Q13515 415 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 UGCGQ16739 394 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 BMT2Q1RMZ1 405 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 HS1BP3Q53T59 392 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 FAM109BQ6ICB4 259 aaPredicted RBP11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 TTI2Q6NXR4 508 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 CYFIP1Q7L576 1253 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 CCDC60Q8IWA6 550 aaPredicted RBP11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 RPUSD2Q8IZ73 545 aaKnown RBP11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 MYOCDQ8IZQ8 938 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 CAGE1Q8TC20 777 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 AFAP1L1Q8TED9 768 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 P2RX5Q93086 422 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 NOC4LQ9BVI4 516 aaKnown RBP11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 FANCLQ9NW38 375 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 GABBR1Q9UBS5 961 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 GTF2IRD1Q9UHL9 959 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 PPME1Q9Y570 386 aa11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 MAFBQ9Y5Q3 323 aaPredicted RBP11.12□□□□□ -0.63
LDLRAD3-206ENST00000534091 EVPLQ92817 2033 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 NPHP3-ACAD11A0A0J9YXS1 232 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 GSTTP1A0A1W2PQM5 241 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 EIF3DO15371 548 aaKnown RBP eCLIP11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 CBFA2T2O43439 604 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 ZNF862O60290 1169 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 LGR5O75473 907 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 FAM13AO94988 1023 aa11.11□□□□□ -0.63
LDLRAD3-206ENST00000534091 RPLP2P05387 115 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms