RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ARHGEF35A5YM69 484 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 RBAK-RBAKDNI3L0D1 243 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 ZBTB39O15060 712 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 MED24O75448 989 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 DGAT1O75907 488 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 STAG3L1P0CL83 205 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 XRCC6P12956 609 aaKnown RBP eCLIP14.91□□□□□ -0.02
CAPN1-227ENST00000533909 DARSP14868 501 aaKnown RBP14.91□□□□□ -0.02
CAPN1-227ENST00000533909 ZSCAN20P17040 1043 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-227ENST00000533909 SFPQP23246 707 aaKnown RBP eCLIP14.91□□□□□ -0.02
CAPN1-227ENST00000533909 RPA1P27694 616 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 DRP2Q13474 957 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 GRIN2CQ14957 1233 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 ZRSR1Q15695 479 aaKnown RBP14.91□□□□□ -0.02
CAPN1-227ENST00000533909 POTEGQ6S5H5 508 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 ZNF410Q86VK4 478 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 C4orf32Q8N8J7 132 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 ZNF579Q8NAF0 562 aaKnown RBP14.91□□□□□ -0.02
CAPN1-227ENST00000533909 TMEM40Q8WWA1 233 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 MYLIPQ8WY64 445 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 TMEM143Q96AN5 459 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 GUCD1Q96NT3 240 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-227ENST00000533909 PRDM12Q9H4Q4 367 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 DHX33Q9H6R0 707 aaKnown RBP14.91□□□□□ -0.02
CAPN1-227ENST00000533909 ERVK-5Q9HDB9 667 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 COL4A3BPQ9Y5P4 624 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 SIP14410 1827 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 MYO9BQ13459 2157 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 A0A087WZ62 844 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 VWA3AA6NCI4 1184 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 USO1O60763 962 aaKnown RBP14.9□□□□□ -0.02
CAPN1-227ENST00000533909 SRGAP2CP0DJJ0 459 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 SPATA31C1P0DKV0 1188 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 ATP2C1P98194 919 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-227ENST00000533909 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-227ENST00000533909 TFDP1Q14186 410 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 FAM228AQ86W67 206 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 PRPF31Q8WWY3 499 aaKnown RBP14.9□□□□□ -0.02
CAPN1-227ENST00000533909 ARNTL2Q8WYA1 636 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 CDK5RAP3Q96JB5 506 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 CEP89Q96ST8 783 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 ADAM2Q99965 735 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 FDXACB1Q9BRP7 624 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-227ENST00000533909 CERS4Q9HA82 394 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 C1orf112Q9NSG2 853 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 MTUS1Q9ULD2 1270 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 GBF1Q92538 1859 aa14.9□□□□□ -0.02
CAPN1-227ENST00000533909 A0A087WWV3 80 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 LCHNA4D1U4 455 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 ASAP2O43150 1006 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 STX6O43752 255 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 MUTP22033 750 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 PHKA2P46019 1235 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 RARRES1P49788 294 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 TAP1Q03518 808 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 LAMTOR4Q0VGL1 99 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 MXD4Q14582 209 aaPredicted RBP14.89□□□□□ -0.03
CAPN1-227ENST00000533909 ARL6IP4Q66PJ3 421 aaKnown RBP14.89□□□□□ -0.03
CAPN1-227ENST00000533909 SLC24A5Q71RS6 500 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 NPAS4Q8IUM7 802 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 KSR1Q8IVT5 923 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 IGSF22Q8N9C0 903 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 TGS1Q96RS0 853 aaKnown RBP14.89□□□□□ -0.03
CAPN1-227ENST00000533909 TMX1Q9H3N1 280 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 DBR1Q9UK59 544 aaKnown RBP14.89□□□□□ -0.03
CAPN1-227ENST00000533909 KIAA1024Q9UPX6 916 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 PCDHB7Q9Y5E2 793 aa14.89□□□□□ -0.03
CAPN1-227ENST00000533909 CHD9Q3L8U1 2897 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 LOXHD1Q8IVV2 1947 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 CSDE1O75534 798 aaKnown RBP14.88□□□□□ -0.03
CAPN1-227ENST00000533909 IGFBP4P22692 258 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 SARSP49591 514 aaKnown RBP14.88□□□□□ -0.03
CAPN1-227ENST00000533909 HTRA4P83105 476 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-227ENST00000533909 NCBP1Q09161 790 aaKnown RBP14.88□□□□□ -0.03
CAPN1-227ENST00000533909 BTG3Q14201 252 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-227ENST00000533909 FAM102BQ5T8I3 360 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 MAEAQ7L5Y9 396 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 FIBCD1Q8N539 461 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 RNF149Q8NC42 400 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 MCPH1Q8NEM0 835 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 RASSF8Q8NHQ8 419 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 LINC01599Q8WXQ3 324 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 ZSCAN16Q9H4T2 348 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-227ENST00000533909 RGS18Q9NS28 235 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 DDX19AQ9NUU7 478 aaKnown RBP14.88□□□□□ -0.03
CAPN1-227ENST00000533909 DACT1Q9NYF0 836 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 DNM3Q9UQ16 869 aa14.88□□□□□ -0.03
CAPN1-227ENST00000533909 LINC01553A4QN01 128 aa14.87□□□□□ -0.03
CAPN1-227ENST00000533909 PP2D1A8MPX8 630 aa14.87□□□□□ -0.03
CAPN1-227ENST00000533909 GTPBP6O43824 516 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-227ENST00000533909 PDIA4P13667 645 aaKnown RBP14.87□□□□□ -0.03
CAPN1-227ENST00000533909 FGFR4P22455 802 aa14.87□□□□□ -0.03
CAPN1-227ENST00000533909 SF3A1Q15459 793 aaKnown RBP14.87□□□□□ -0.03
CAPN1-227ENST00000533909 PADI6Q6TGC4 694 aa14.87□□□□□ -0.03
CAPN1-227ENST00000533909 RNF169Q8NCN4 708 aa14.87□□□□□ -0.03
CAPN1-227ENST00000533909 POLR3FQ9H1D9 316 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms