RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 HSDL1Q3SXM5 330 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 GNASQ5JWF2 1037 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 SYT2Q8N9I0 419 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 U2AF1L4Q8WU68 220 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 LENG1Q96BZ8 264 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 TIPINQ9BVW5 301 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 UPF3AQ9H1J1 476 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 BLZF1Q9H2G9 400 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 SYNRGQ9UMZ2 1314 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 A6NJR5 290 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 EML1O00423 815 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 PSMA7O14818 248 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 AXIN1O15169 862 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 ZEB2O60315 1214 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 SORBS3O60504 671 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 KPNA6O60684 536 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 TBCAO75347 108 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 PGK1P00558 417 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 MYL5Q02045 173 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 SP4Q02446 784 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 MCM6Q14566 821 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 DGKDQ16760 1214 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 GPBP1Q86WP2 473 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 C4orf19Q8IY42 314 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 PCSK9Q8NBP7 692 aaKnown RBP12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 AFG1LQ8WV93 481 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 SEPT1Q8WYJ6 367 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 STAMQ92783 540 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 DYDC2Q96IM9 177 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 BHMT2Q9H2M3 363 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
CCDC90B-218ENST00000533761 FAM181BA6NEQ2 426 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 E9PMD0 336 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 BACH1O14867 736 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 ADAMTS4O75173 837 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 TFRCP02786 760 aaKnown RBP12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 IDEP14735 1019 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 CST5P28325 142 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 GJA8P48165 433 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 ACTR2P61160 394 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 CTTNQ14247 550 aaKnown RBP12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 LCE2CQ5TA81 110 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 FAM160B1Q5W0V3 765 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 GPR20Q99678 358 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 AZI2Q9H6S1 392 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 CBX8Q9HC52 389 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 RGL1Q9NZL6 768 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 DBR1Q9UK59 544 aaKnown RBP12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 OGDHLQ9ULD0 1010 aa12.12□□□□□ -0.47
CCDC90B-218ENST00000533761 BICDL2A1A5D9 508 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 CCNE2O96020 404 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 MMP3P08254 477 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 GAP43P17677 238 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 PTGS1P23219 599 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 YWHABP31946 246 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 SLC12A3P55017 1021 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 STXBP4Q6ZWJ1 553 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 BANK1Q8NDB2 785 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 KLHDC9Q8NEP7 349 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 TSEN34Q9BSV6 310 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 ODF2LQ9ULJ1 636 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 COL4A3BPQ9Y5P4 624 aa12.11□□□□□ -0.47
CCDC90B-218ENST00000533761 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 MYMKA6NI61 221 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 KBTBD13C9JR72 458 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 DNM1LO00429 736 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 ATG7O95352 703 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 TPM3P06753 285 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 SUPT20HL2P0C7V6 817 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 HOXD8P13378 290 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 TCF7P36402 384 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 SLC26A2P50443 739 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 BEX3Q00994 111 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 PAK1Q13153 545 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 LRRC41Q15345 812 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 KCNA10Q16322 511 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 ECM1Q16610 540 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 TPD52L1Q16890 204 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 CTC1Q2NKJ3 1217 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 COBLL1Q53SF7 1204 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 C11orf57Q6ZUT1 292 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 DYMQ7RTS9 669 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 LUZP1Q86V48 1076 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 EXOC8Q8IYI6 725 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 TNS4Q8IZW8 715 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 SLC17A8Q8NDX2 589 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 ANKRD20A12PQ8NF67 263 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 FAM167AQ96KS9 214 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 PANK4Q9NVE7 773 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 SEL1LQ9UBV2 794 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 KCNG1Q9UIX4 513 aa12.1□□□□□ -0.47
CCDC90B-218ENST00000533761 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms