RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 FAM114A2Q9NRY5 505 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 FANCLQ9NW38 375 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 SUCLA2Q9P2R7 463 aaPredicted RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 POTEMA6NI47 508 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 RNASE9P60153 205 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 ITKQ08881 620 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 CFAP157Q5JU67 520 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 TADA2BQ86TJ2 420 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 P3H4Q92791 437 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 MXRA8Q9BRK3 442 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 DDX23Q9BUQ8 820 aaKnown RBP12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 PPP1R9AQ9ULJ8 1098 aa12.14□□□□□ -0.47
AMBRA1-211ENST00000533727 SART1O43290 800 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 SH3BGRP55822 239 aaPredicted RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 ZNF699Q32M78 642 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 SFR1Q86XK3 245 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 ZKSCAN4Q969J2 545 aaPredicted RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 CCDC68Q9H2F9 335 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 TM4SF1P30408 202 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 ETF1P62495 437 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 DACT2Q5SW24 774 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 CASC4Q6P4E1 433 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 TOGARAM2Q6ZUX3 1019 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 MAN1B1Q9UKM7 699 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 STRIP2Q9ULQ0 834 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 ZNF189O75820 626 aaPredicted RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 GNGT1P63211 74 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 NOGQ13253 232 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 LONRF2Q1L5Z9 754 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 OR6B2Q6IFH4 312 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 MED4Q9NPJ6 270 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 SPATS2LQ9NUQ6 558 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 RRP15Q9Y3B9 282 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 PRKCBP05771 671 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 VIL1P09327 827 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 TCP1P17987 556 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 CDC27P30260 824 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 MAP7D1Q3KQU3 841 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 POTEAQ6S8J7 498 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 RNF10Q8N5U6 811 aaKnown RBP12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 ATP2A3Q93084 1043 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 HYOU1Q9Y4L1 999 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 CAMTA1Q9Y6Y1 1673 aa12.13□□□□□ -0.47
AMBRA1-211ENST00000533727 SYNGAP1Q96PV0 1343 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 RPS6KA5O75582 802 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 CYP2C9P11712 490 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 SLC26A2P50443 739 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 MTMR3Q13615 1198 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 NBPF12Q5TAG4 269 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 CEP120Q8N960 986 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 MCUR1Q96AQ8 359 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 ZNF653Q96CK0 615 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 ANKEF1Q9NU02 776 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 SLC16A4O15374 487 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 ATP2C1P98194 919 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 NBPF9Q3BBW0 867 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 FYB2Q5VWT5 728 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 ZNF746Q6NUN9 644 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 ARHGAP24Q8N264 748 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 IGDCC4Q8TDY8 1250 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 ARHGEF2Q92974 986 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 MOV10L1Q9BXT6 1211 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 UBE2TQ9NPD8 197 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 PIN4Q9Y237 131 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 POTECB2RU33 542 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 PHBP35232 272 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 SNRPFP62306 86 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 PPIL2Q13356 520 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 RNF219Q5W0B1 726 aaPredicted RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 TMEM35BQ8NCS4 154 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 HVCN1Q96D96 273 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 TNIP3Q96KP6 325 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 KIF9Q9HAQ2 790 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 CARNS1A5YM72 827 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 ATP8B1O43520 1251 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 NR3C1P04150 777 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 SH2D4BQ5SQS7 431 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 PHLDB2Q86SQ0 1253 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 RPUSD2Q8IZ73 545 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 DDX50Q9BQ39 737 aaKnown RBP12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
AMBRA1-211ENST00000533727 EPB41L4AQ9HCS5 686 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms