RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ADAMTS10Q9H324 1103 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 UBE2ZQ9H832 354 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-225ENST00000533704 ATP6V0A4Q9HBG4 840 aa11.71□□□□□ -0.53
CAPN1-225ENST00000533704 ALG13Q9NP73 1137 aaKnown RBP11.71□□□□□ -0.53
CAPN1-225ENST00000533704 C9IYK1 514 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 TBX3O15119 743 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 DKC1O60832 514 aaKnown RBP eCLIP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 STBD1O95210 358 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 P4HBP07237 508 aaKnown RBP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 FGFR1P11362 822 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 KCNA5P22460 613 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 NPEPPSP55786 919 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 CTTNQ14247 550 aaKnown RBP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 EPHA7Q15375 998 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 CALCRLQ16602 461 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 TCEAL5Q5H9L2 206 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 FAM102BQ5T8I3 360 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 ANO5Q75V66 913 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 RHPN2Q8IUC4 686 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 SLFN12Q8IYM2 578 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 CLP1Q92989 425 aaKnown RBP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 DYDC2Q96IM9 177 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 C8orf76Q96K31 380 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 CEP170P1Q96L14 293 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 NLRP4Q96MN2 994 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 LXNQ9BS40 222 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 GCOM2Q9BZD3 368 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 NSUN3Q9H649 340 aaKnown RBP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 CYP26B1Q9NR63 512 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 RGS18Q9NS28 235 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 RGL1Q9NZL6 768 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 SUCLA2Q9P2R7 463 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-225ENST00000533704 BDP1A6H8Y1 2624 aa11.7□□□□□ -0.54
CAPN1-225ENST00000533704 A0A087WZ62 844 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 NEMFO60524 1076 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 LINC00271P0C7V0 271 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 BMP1P13497 986 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 DARSP14868 501 aaKnown RBP11.69□□□□□ -0.54
CAPN1-225ENST00000533704 TXKP42681 527 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 POLGP54098 1239 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-225ENST00000533704 GNL2Q13823 731 aaKnown RBP11.69□□□□□ -0.54
CAPN1-225ENST00000533704 DSC3Q14574 896 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 TPH2Q8IWU9 490 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
CAPN1-225ENST00000533704 FAM184AQ8NB25 1140 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-225ENST00000533704 TMEM161AQ9NX61 479 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 WRAP73Q9P2S5 460 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-225ENST00000533704 HCSTQ9UBK5 93 aa11.69□□□□□ -0.54
CAPN1-225ENST00000533704 IGKV6-21A0A0C4DH24 114 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 C5orf67F2Z3F1 127 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 WNT7AO00755 349 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 MAFO75444 373 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-225ENST00000533704 YWHABP31946 246 aaKnown RBP11.68□□□□□ -0.54
CAPN1-225ENST00000533704 MCM7P33993 719 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 XKR9Q5GH70 373 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 ABI1Q8IZP0 508 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 KLHL23Q8NBE8 558 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 SLC7A3Q8WY07 619 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 TMEM143Q96AN5 459 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 ZSCAN31Q96LW9 406 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-225ENST00000533704 CCDC43Q96MW1 224 aaKnown RBP11.68□□□□□ -0.54
CAPN1-225ENST00000533704 CEP89Q96ST8 783 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 JPH2Q9BR39 696 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-225ENST00000533704 PLVAPQ9BX97 442 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 LMAN2LQ9H0V9 348 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 IGFLR1Q9H665 355 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 CLDND1Q9NY35 253 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 PCDHA12Q9UN75 941 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 PLAGL2Q9UPG8 496 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 PCDHB12Q9Y5F1 795 aa11.68□□□□□ -0.54
CAPN1-225ENST00000533704 VCANP13611 3396 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 H3BQ06 376 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-225ENST00000533704 ZBTB39O15060 712 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 ITGB1P05556 798 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 SRGAP2CP0DJJ0 459 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.54
CAPN1-225ENST00000533704 CDC42EP1Q00587 391 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 EMC2Q15006 297 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 LONRF3Q496Y0 759 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 TWF2Q6IBS0 349 aaKnown RBP11.67□□□□□ -0.54
CAPN1-225ENST00000533704 OTUD6AQ7L8S5 288 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 CATSPER4Q7RTX7 472 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 ECHDC2Q86YB7 292 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 THNSL1Q8IYQ7 743 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 KIF2CQ99661 725 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 EIF2AK1Q9BQI3 630 aaKnown RBP11.67□□□□□ -0.54
CAPN1-225ENST00000533704 LLPHQ9BRT6 129 aaKnown RBP11.67□□□□□ -0.54
CAPN1-225ENST00000533704 ZSWIM4Q9H7M6 989 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 TTC12Q9H892 705 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-225ENST00000533704 SH2B1Q9NRF2 756 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-225ENST00000533704 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms