RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PHF7Q9BWX1 381 aaPredicted RBP9.84□□□□□ -0.83
COPB1-210ENST00000533533 AGO4Q9HCK5 861 aaKnown RBP9.84□□□□□ -0.83
COPB1-210ENST00000533533 ERVK-5Q9HDB9 667 aa9.84□□□□□ -0.83
COPB1-210ENST00000533533 TLR9Q9NR96 1032 aa9.84□□□□□ -0.83
COPB1-210ENST00000533533 AAASQ9NRG9 546 aa9.84□□□□□ -0.83
COPB1-210ENST00000533533 GJB4Q9NTQ9 266 aa9.84□□□□□ -0.83
COPB1-210ENST00000533533 PCDHA4Q9UN74 947 aa9.84□□□□□ -0.83
COPB1-210ENST00000533533 GINS2Q9Y248 185 aa9.84□□□□□ -0.83
COPB1-210ENST00000533533 NOC2LQ9Y3T9 749 aaKnown RBP9.84□□□□□ -0.83
COPB1-210ENST00000533533 VPS13AQ96RL7 3174 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 FSD2A1L4K1 749 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 DENND3A2RUS2 1198 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 TBKBP1A7MCY6 615 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 C9IYK1 514 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 BACH1O14867 736 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 HBP1O60381 514 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 RPS6KA5O75582 802 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 FGF18O76093 207 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 CCNE2O96020 404 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 ATF7P17544 494 aaPredicted RBP9.83□□□□□ -0.84
COPB1-210ENST00000533533 SREBF1P36956 1147 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 CLK2P49760 499 aaKnown RBP9.83□□□□□ -0.84
COPB1-210ENST00000533533 PTPN5P54829 565 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 ERVFC1P60507 584 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 GUCY1B3Q02153 619 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 ODR4Q5SWX8 454 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 FAM102BQ5T8I3 360 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 IER5LQ5T953 404 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 ABHD15Q6UXT9 468 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 SLC24A5Q71RS6 500 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 PRSS33Q8NF86 280 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 VN1R2Q8NFZ6 395 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 TMEM40Q8WWA1 233 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 SUSD6Q92537 303 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 RPGRIP1Q96KN7 1286 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 PHOX2BQ99453 314 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 CDCA3Q99618 268 aaPredicted RBP9.83□□□□□ -0.84
COPB1-210ENST00000533533 PRRX2Q99811 253 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 ADAM2Q99965 735 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 CDHR5Q9HBB8 845 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 BRMS1Q9HCU9 246 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 RGS18Q9NS28 235 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 C1orf112Q9NSG2 853 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 ST3GAL5Q9UNP4 418 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 COL1A2P08123 1366 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 MYO15AQ9UKN7 3530 aa9.83□□□□□ -0.84
COPB1-210ENST00000533533 CCDC194A0A1B0GVG4 234 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 ZBTB42B2RXF5 422 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 DDX39AO00148 427 aaKnown RBP9.82□□□□□ -0.84
COPB1-210ENST00000533533 FSCN2O14926 492 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 GPR182O15218 404 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 FDPSP14324 419 aaKnown RBP9.82□□□□□ -0.84
COPB1-210ENST00000533533 KRT2P35908 639 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 MCM2P49736 904 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 FAM189BP81408 668 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 RBM10P98175 930 aaKnown RBP9.82□□□□□ -0.84
COPB1-210ENST00000533533 SIGLEC14Q08ET2 396 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 ST3GAL1Q11201 340 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 DUSP6Q16828 381 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 ZNF484Q5JVG2 852 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 FAM160B1Q5W0V3 765 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 GALNT17Q6IS24 598 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 PDE12Q6L8Q7 609 aaKnown RBP9.82□□□□□ -0.84
COPB1-210ENST00000533533 PDXDC2PQ6P474 469 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 NIPA1Q7RTP0 329 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 PLA2G4DQ86XP0 818 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 CCDC60Q8IWA6 550 aaPredicted RBP9.82□□□□□ -0.84
COPB1-210ENST00000533533 SUGP1Q8IWZ8 645 aaKnown RBP9.82□□□□□ -0.84
COPB1-210ENST00000533533 THNSL1Q8IYQ7 743 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 FBXL6Q8N531 539 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 ZNF579Q8NAF0 562 aaKnown RBP9.82□□□□□ -0.84
COPB1-210ENST00000533533 COLGALT1Q8NBJ5 622 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 TMX3Q96JJ7 454 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 PHF20Q9BVI0 1012 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 ZNF302Q9NR11 478 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 TYW1Q9NV66 732 aaKnown RBP9.82□□□□□ -0.84
COPB1-210ENST00000533533 HCSTQ9UBK5 93 aa9.82□□□□□ -0.84
COPB1-210ENST00000533533 DHX15O43143 795 aaKnown RBP9.81□□□□□ -0.84
COPB1-210ENST00000533533 CD2BP2O95400 341 aaKnown RBP9.81□□□□□ -0.84
COPB1-210ENST00000533533 FGFR1P11362 822 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 LAG3P18627 525 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 CRYBB1P53674 252 aaPredicted RBP9.81□□□□□ -0.84
COPB1-210ENST00000533533 HMGN5P82970 282 aaKnown RBP9.81□□□□□ -0.84
COPB1-210ENST00000533533 TCF15Q12870 199 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 GNL2Q13823 731 aaKnown RBP9.81□□□□□ -0.84
COPB1-210ENST00000533533 KCNC3Q14003 757 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 NONOQ15233 471 aaKnown RBP eCLIP9.81□□□□□ -0.84
COPB1-210ENST00000533533 SAFBQ15424 915 aaKnown RBP eCLIP9.81□□□□□ -0.84
COPB1-210ENST00000533533 INF2Q27J81 1249 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 KIZQ2M2Z5 673 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 PRR16Q569H4 304 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 SWSAP1Q6NVH7 229 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 MIS18BP1Q6P0N0 1132 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 TMEM184AQ6ZMB5 413 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 KRT25Q7Z3Z0 450 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 FAM228AQ86W67 206 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 TBCKQ8TEA7 893 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 C8orf76Q96K31 380 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 LLPHQ9BRT6 129 aaKnown RBP9.81□□□□□ -0.84
COPB1-210ENST00000533533 S1PR5Q9H228 398 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms