RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CNGA1P29973 690 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 MRE11P49959 708 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 RRADP55042 308 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 SESN3P58005 492 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 NFKB2Q00653 900 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 STRN3Q13033 797 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 DDB1Q16531 1140 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 AGBL4Q5VU57 503 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 BROXQ5VW32 411 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 LARP4Q71RC2 724 aaKnown RBP eCLIP3.83□□□□□ -1.8
ATM-220ENST00000533526 FILIP1Q7Z7B0 1213 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 CIR1Q86X95 450 aaPredicted RBP3.83□□□□□ -1.8
ATM-220ENST00000533526 SLC5A5Q92911 643 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 ZNF496Q96IT1 587 aaPredicted RBP3.83□□□□□ -1.8
ATM-220ENST00000533526 HIST1H2AHQ96KK5 128 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 LMF1Q96S06 567 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 HIST1H2AJQ99878 128 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 MYL10Q9BUA6 226 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 PPP4R1LQ9P1A2 415 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 PUF60Q9UHX1 559 aaKnown RBP3.83□□□□□ -1.8
ATM-220ENST00000533526 DENND2AQ9ULE3 1009 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 APOBEC2Q9Y235 224 aaKnown RBP3.83□□□□□ -1.8
ATM-220ENST00000533526 NR2E1Q9Y466 385 aa3.83□□□□□ -1.8
ATM-220ENST00000533526 SBNO2Q9Y2G9 1366 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 MYPNQ86TC9 1320 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 B8ZZF3 427 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 NEMP1O14524 444 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 DNAJC6O75061 913 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 APOL3O95236 402 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 CNOT4O95628 575 aaKnown RBP3.82□□□□□ -1.8
ATM-220ENST00000533526 GPR15P49685 360 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 STAT5BP51692 787 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 MYBPC3Q14896 1274 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 CCDC178Q5BJE1 867 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 BCL6BQ8N143 479 aaPredicted RBP3.82□□□□□ -1.8
ATM-220ENST00000533526 AFAP1L2Q8N4X5 818 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 TTC9BQ8N6N2 239 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 UBR7Q8N806 425 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 CHST13Q8NET6 341 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 OR5AN1Q8NGI8 311 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 FERMT2Q96AC1 680 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 NEIL1Q96FI4 390 aaPredicted RBP3.82□□□□□ -1.8
ATM-220ENST00000533526 DYDC2Q96IM9 177 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 WDR92Q96MX6 357 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 SSBP3Q9BWW4 388 aaPredicted RBP3.82□□□□□ -1.8
ATM-220ENST00000533526 OSBPL6Q9BZF3 934 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 PITHD1Q9GZP4 211 aaPredicted RBP3.82□□□□□ -1.8
ATM-220ENST00000533526 HAPLN2Q9GZV7 340 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 POFUT1Q9H488 388 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 POLR3BQ9NW08 1133 aaPredicted RBP3.82□□□□□ -1.8
ATM-220ENST00000533526 FAM184BQ9ULE4 1060 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 PTPN22Q9Y2R2 807 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 NUMBLQ9Y6R0 609 aa3.82□□□□□ -1.8
ATM-220ENST00000533526 ELL2O00472 640 aaPredicted RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 PRRG2O14669 202 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 NRP2O60462 931 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 FSBPO95073 299 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 CR2P20023 1033 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 XPAP23025 273 aaPredicted RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 RPS19P39019 145 aaKnown RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 ANTXR2P58335 489 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 RNF151Q2KHN1 245 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 SPATS1Q496A3 300 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 RNF219Q5W0B1 726 aaPredicted RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 LIMS2Q7Z4I7 341 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 STRA8Q7Z7C7 330 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 TAX1BP1Q86VP1 789 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 CDYL2Q8N8U2 506 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 GIMAP8Q8ND71 665 aaPredicted RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 WDR66Q8TBY9 1149 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 GCDHQ92947 438 aaPredicted RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 NKD2Q969F2 451 aaPredicted RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 NOL10Q9BSC4 688 aaKnown RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 SLC6A15Q9H2J7 730 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 C12orf65Q9H3J6 166 aaKnown RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 NELFAQ9H3P2 528 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 SEMA4AQ9H3S1 761 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 MTG2Q9H4K7 406 aa3.81□□□□□ -1.8
ATM-220ENST00000533526 CTDP1Q9Y5B0 961 aaPredicted RBP3.81□□□□□ -1.8
ATM-220ENST00000533526 KRTAP4-8A0A0G2JLE6 195 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 KDM1AO60341 852 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 OPHN1O60890 802 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 EYA4O95677 639 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 ADAM15Q13444 863 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 HS1BP3Q53T59 392 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 IQSEC1Q6DN90 963 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 UNQ6494/PRO21346Q6UXR6 183 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 HDGFL2Q7Z4V5 671 aaPredicted RBP3.8□□□□□ -1.8
ATM-220ENST00000533526 CXorf67Q86X51 503 aaPredicted RBP3.8□□□□□ -1.8
ATM-220ENST00000533526 PLA2G15Q8NCC3 412 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 RABGGTAQ92696 567 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 SLC7A6OSQ96CW6 309 aaPredicted RBP3.8□□□□□ -1.8
ATM-220ENST00000533526 LOXL4Q96JB6 756 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 ACAP3Q96P50 834 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 LRRC37BQ96QE4 947 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 KIAA1683Q9H0B3 1180 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 MEGF9Q9H1U4 602 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 MCM8Q9UJA3 840 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 OAZ3Q9UMX2 235 aa3.8□□□□□ -1.8
ATM-220ENST00000533526 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms