RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SLC37A4O43826 429 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 SAT1P21673 171 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 ITIH3Q06033 890 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 KRT81Q14533 505 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 KCNB1Q14721 858 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 SEC23AQ15436 765 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 ANKRD20A3Q5VUR7 823 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 NYAP1Q6ZVC0 841 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 SP8Q8IXZ3 490 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 XXYLT1Q8NBI6 393 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 AGXT2Q9BYV1 514 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 STAM2O75886 525 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 RHOBTB3O94955 611 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 UBAP1Q9NZ09 502 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 hCG_2014768A0A024R1R8 64 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 DENND3A2RUS2 1198 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 FTLP02792 175 aaPredicted RBP13.16□□□□□ -0.3
BDNF-218ENST00000533246 NR1D1P20393 614 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 PSMC4P43686 418 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 DR1Q01658 176 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
BDNF-218ENST00000533246 GEN1Q17RS7 908 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 REXO1L1PQ8IX06 675 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 RILPQ96NA2 401 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 FRMPD1Q5SYB0 1578 aa13.16□□□□□ -0.3
BDNF-218ENST00000533246 WDR91A4D1P6 747 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 CCDC160A6NGH7 325 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 PRELPP51888 382 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 YWHAGP61981 247 aaKnown RBP eCLIP13.15□□□□□ -0.3
BDNF-218ENST00000533246 PPP2R5EQ16537 467 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 TRIM42Q8IWZ5 723 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 PROM2Q8N271 834 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 TCP11Q8WWU5 503 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
BDNF-218ENST00000533246 PLCB1Q9NQ66 1216 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 PLAAQ9Y263 795 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 SRGNP10124 158 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 PKN1Q16512 942 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 C10orf76Q5T2E6 689 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
BDNF-218ENST00000533246 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 SH2D3CQ8N5H7 860 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 GIMAP8Q8ND71 665 aaPredicted RBP13.15□□□□□ -0.3
BDNF-218ENST00000533246 LRRN4CLQ8ND94 238 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 MCUR1Q96AQ8 359 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 C11orf70Q9BRQ4 267 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 ADPGKQ9BRR6 497 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 GABBR1Q9UBS5 961 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
BDNF-218ENST00000533246 FHOD1Q9Y613 1164 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 OVOS2A0A0G2JMS6 1433 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 KLHL33A6NCF5 533 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 ZNF233A6NK53 670 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 ADRA2BP18089 450 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 USP14P54578 494 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 HADHQ16836 314 aaKnown RBP13.15□□□□□ -0.3
BDNF-218ENST00000533246 FYB2Q5VWT5 728 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 FOXR1Q6PIV2 292 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 MAIP1Q8WWC4 291 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
BDNF-218ENST00000533246 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 REEP2Q9BRK0 252 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 ZMYND12Q9H0C1 365 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 FAM114A2Q9NRY5 505 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 RNF146Q9NTX7 359 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 SEPT10Q9P0V9 454 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 HESX1Q9UBX0 185 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 CNOT8Q9UFF9 292 aaKnown RBP13.15□□□□□ -0.3
BDNF-218ENST00000533246 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 MAD2L2Q9UI95 211 aa13.15□□□□□ -0.3
BDNF-218ENST00000533246 DIP2BQ9P265 1576 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 TCRBV5S4A2TA0A5A2 114 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 MYBP10242 640 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 MYO1EQ12965 1108 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 RBM43Q6ZSC3 357 aaKnown RBP13.14□□□□□ -0.31
BDNF-218ENST00000533246 PBKQ96KB5 322 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 TYW1Q9NV66 732 aaKnown RBP13.14□□□□□ -0.31
BDNF-218ENST00000533246 EMSYQ7Z589 1322 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 CNGA1P29973 690 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 PSMD6Q15008 389 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 C16orf86Q6ZW13 317 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 GDAP1Q8TB36 358 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 RNF25Q96BH1 459 aaPredicted RBP13.14□□□□□ -0.31
BDNF-218ENST00000533246 LACRTQ9GZZ8 138 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 KLHL14Q9P2G3 628 aa13.14□□□□□ -0.31
BDNF-218ENST00000533246 CAPN9O14815 690 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms