RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SPC25Q9HBM1 224 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 GUCY2CP25092 1073 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 TERF1P54274 439 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 COASYQ13057 564 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 TARBP2Q15633 366 aaKnown RBP20.42■□□□□ 0.86
SMPD1-208ENST00000533123 CCDC65Q8IXS2 484 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 CEP89Q96ST8 783 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 ZNF500O60304 480 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-208ENST00000533123 ADAMTS4O75173 837 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 SLC9C1Q4G0N8 1177 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 HERC4Q5GLZ8 1057 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-208ENST00000533123 TTI2Q6NXR4 508 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 VSTM4Q8IW00 320 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 LRRC8AQ8IWT6 810 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 KAT2BQ92831 832 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 DHTKD1Q96HY7 919 aaPredicted RBP20.41■□□□□ 0.86
SMPD1-208ENST00000533123 UPF3AQ9H1J1 476 aaKnown RBP20.41■□□□□ 0.86
SMPD1-208ENST00000533123 GPRC5CQ9NQ84 441 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 ARID2Q68CP9 1835 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 ZBTB42B2RXF5 422 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 HBP1O60381 514 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 HIP1RO75146 1068 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 TBCAO75347 108 aaKnown RBP20.41■□□□□ 0.86
SMPD1-208ENST00000533123 DGAT1O75907 488 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 SOX10P56693 466 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 DAW1Q8N136 415 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 PPP1R13LQ8WUF5 828 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 TRAPPC12Q8WVT3 735 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 TBC1D7Q9P0N9 293 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 IMPACTQ9P2X3 320 aa20.41■□□□□ 0.86
SMPD1-208ENST00000533123 A0A1B0GTH6 734 aa20.4■□□□□ 0.86
SMPD1-208ENST00000533123 FRMD3A2A2Y4 597 aa20.4■□□□□ 0.86
SMPD1-208ENST00000533123 F2P00734 622 aa20.4■□□□□ 0.86
SMPD1-208ENST00000533123 CTCFP49711 727 aaPredicted RBP20.4■□□□□ 0.86
SMPD1-208ENST00000533123 POLGP54098 1239 aaPredicted RBP20.4■□□□□ 0.86
SMPD1-208ENST00000533123 ANKRD40Q6AI12 368 aa20.4■□□□□ 0.86
SMPD1-208ENST00000533123 IRF2BP1Q8IU81 584 aa20.4■□□□□ 0.86
SMPD1-208ENST00000533123 CREBRFQ8IUR6 639 aa20.4■□□□□ 0.86
SMPD1-208ENST00000533123 P2RX5Q93086 422 aa20.4■□□□□ 0.86
SMPD1-208ENST00000533123 EEF2KMTQ96G04 330 aa20.4■□□□□ 0.86
SMPD1-208ENST00000533123 FAM13AO94988 1023 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 INSRRP14616 1297 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 IGBP1P78318 339 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 PURAQ00577 322 aaKnown RBP20.39■□□□□ 0.86
SMPD1-208ENST00000533123 MAPK7Q13164 816 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 NR1I3Q14994 352 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 LRRC41Q15345 812 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 KIAA0753Q2KHM9 967 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 FAM102BQ5T8I3 360 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 ARMCX5Q6P1M9 558 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 CTU1Q7Z7A3 348 aaKnown RBP20.39■□□□□ 0.86
SMPD1-208ENST00000533123 DUSP9Q99956 384 aaKnown RBP20.39■□□□□ 0.86
SMPD1-208ENST00000533123 FGFBP2Q9BYJ0 223 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 PDCL3Q9H2J4 239 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 XPNPEP1Q9NQW7 623 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 PDLIM7Q9NR12 457 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 ODF2LQ9ULJ1 636 aa20.39■□□□□ 0.86
SMPD1-208ENST00000533123 KCNJ18B7U540 433 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 TEX33O43247 280 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 CCNE1P24864 410 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 KCNJ12Q14500 433 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 KRT31Q15323 416 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 LHX8Q68G74 356 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 SLC7A3Q8WY07 619 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 ZBTB10Q96DT7 871 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 SEMA6BQ9H3T3 888 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 DHX33Q9H6R0 707 aaKnown RBP20.39■□□□□ 0.85
SMPD1-208ENST00000533123 ATP6V0A4Q9HBG4 840 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 PARVGQ9HBI0 331 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 COL4A3BPQ9Y5P4 624 aa20.39■□□□□ 0.85
SMPD1-208ENST00000533123 NKX3-2P78367 333 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 TBC1D8BQ0IIM8 1120 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 EMC2Q15006 297 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 COBLL1Q53SF7 1204 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 TCP11X2Q5H9J9 407 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 CXCL17Q6UXB2 119 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 SFR1Q86XK3 245 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 MYCT1Q8N699 235 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 SRRTQ9BXP5 876 aaKnown RBP20.38■□□□□ 0.85
SMPD1-208ENST00000533123 UNC93B1Q9H1C4 597 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 MSCO60682 206 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 GSDMDP57764 484 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 MFSD10Q14728 455 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 MTFR1Q15390 333 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 KLHDC9Q8NEP7 349 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 KIAA1524Q8TCG1 905 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 GTPBP4Q9BZE4 634 aaKnown RBP20.38■□□□□ 0.85
SMPD1-208ENST00000533123 TAB2Q9NYJ8 693 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 MYH11P35749 1972 aa20.38■□□□□ 0.85
SMPD1-208ENST00000533123 ZNF131P52739 623 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 GOLGA8FQ08AF8 430 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 GOLGA8DPQ0D2H9 430 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 KCNA10Q16322 511 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 FAM26FQ5R3K3 315 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 CSGALNACT2Q8N6G5 542 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 MCPH1Q8NEM0 835 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 TMEM143Q96AN5 459 aa20.37■□□□□ 0.85
SMPD1-208ENST00000533123 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMPD1-208ENST00000533123 LIMA1Q9UHB6 759 aaKnown RBP20.37■□□□□ 0.85
SMPD1-208ENST00000533123 PCDHA2Q9Y5H9 948 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms