RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 RFC2P35250 354 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 ARL2P36404 184 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 SYKP43405 635 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 CRYBB1P53674 252 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 NLRP11P59045 1033 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 AMPD3Q01432 767 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 DRP2Q13474 957 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 NAALADL2Q58DX5 795 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 GPBP1Q86WP2 473 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 RHPN2Q8IUC4 686 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 RPUSD2Q8IZ73 545 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 TMEM87AQ8NBN3 555 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 LRRC15Q8TF66 581 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 KIFAP3Q92845 792 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 RUSC1Q9BVN2 902 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 LRRC27Q9C0I9 530 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 WNT8AQ9H1J5 351 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 USP25Q9UHP3 1055 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 GINS2Q9Y248 185 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 TRPV2Q9Y5S1 764 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 CDY2AQ9Y6F7 541 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 H0YGN5 161 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 GPR32O75388 356 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 SRGAP2CP0DJJ0 459 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 GUCY2CP25092 1073 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 NDUFA8P51970 172 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 MDM2Q00987 491 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 MGAT3Q09327 533 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 LAMTOR4Q0VGL1 99 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 TFDP1Q14186 410 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 E2F4Q16254 413 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 KIZQ2M2Z5 673 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 TRAF7Q6Q0C0 670 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 CEP57L1Q8IYX8 460 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 USP38Q8NB14 1042 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 NLRP7Q8WX94 980 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 SCLYQ96I15 445 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 IFT74Q96LB3 600 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 DRC1Q96MC2 740 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 SCLT1Q96NL6 688 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 MAGEF1Q9HAY2 307 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 GPRC5CQ9NQ84 441 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 KCNG1Q9UIX4 513 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 SQORQ9Y6N5 450 aa12.46□□□□□ -0.41
TRAPPC4-211ENST00000533012 MYH15Q9Y2K3 1946 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 GOLGA6L22H0YM25 854 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 HIP1RO75146 1068 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 SLFN14P0C7P3 912 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 CSF2RAP15509 400 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 GLRA2P23416 452 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 EIF4BP23588 611 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 GPC3P51654 580 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 FPGSQ05932 587 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 RAD51AP2Q09MP3 1159 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 PPIGQ13427 754 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 PPP2R5AQ15172 486 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 ARSHQ5FYA8 562 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZNF410Q86VK4 478 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 RNF149Q8NC42 400 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 CCDC34Q96HJ3 373 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZNF668Q96K58 619 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 NLRP4Q96MN2 994 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 PPP1R16BQ96T49 567 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 GCOM2Q9BZD3 368 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 INO80BQ9C086 356 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 ADAMTS10Q9H324 1103 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 C17orf75Q9HAS0 396 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 CDHR5Q9HBB8 845 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 POLD4Q9HCU8 107 aa12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 MYH9P35579 1960 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-211ENST00000533012 A0A087WZ62 844 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 NPHP3-ACAD11A0A0J9YXS1 232 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 SFI1A8K8P3 1242 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 NBNO60934 754 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 GADD45BO75293 160 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 RPS6KA5O75582 802 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 ZNF202O95125 648 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 PFKMP08237 780 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 UBE2HP62256 183 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 POU5F1BQ06416 359 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 GIT2Q14161 759 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 LONRF3Q496Y0 759 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 FBXO47Q5MNV8 452 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 ODR4Q5SWX8 454 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 DEFB128Q7Z7B8 93 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 CNNM3Q8NE01 707 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 ASAP3Q8TDY4 903 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 DDX12PQ92771 950 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 OSMRQ99650 979 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 FDXACB1Q9BRP7 624 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 GOLPH3LQ9H4A5 285 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 IL23AQ9NPF7 189 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 KBTBD4Q9NVX7 518 aa12.44□□□□□ -0.42
TRAPPC4-211ENST00000533012 SERTAD1Q9UHV2 236 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms