RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 GFPT2O94808 682 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 CALB1P05937 261 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 RNF10Q8N5U6 811 aaKnown RBP11.51□□□□□ -0.57
COLCA1-203ENST00000532918 RCOR1Q9UKL0 485 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 FAF1Q9UNN5 650 aaPredicted RBP11.51□□□□□ -0.57
COLCA1-203ENST00000532918 FLT1P17948 1338 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 RRN3P2A6NIE6 340 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 PAMP19021 973 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 U2AF2P26368 475 aaKnown RBP eCLIP11.51□□□□□ -0.57
COLCA1-203ENST00000532918 SCYL3Q8IZE3 742 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 TNIP3Q96KP6 325 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 MMTAG2Q9BU76 263 aaKnown RBP11.51□□□□□ -0.57
COLCA1-203ENST00000532918 VCX3AQ9NNX9 186 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 SERPING1P05155 500 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 PMLP29590 882 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 CTNNA1P35221 906 aaKnown RBP11.51□□□□□ -0.57
COLCA1-203ENST00000532918 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 LRRC43Q8N309 656 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 ARRDC4Q8NCT1 418 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 CHMP6Q96FZ7 201 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 PAGE5Q96GU1 130 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 TRIM4Q9C037 500 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 TUFT1Q9NNX1 390 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 LSM7Q9UK45 103 aaKnown RBP11.51□□□□□ -0.57
COLCA1-203ENST00000532918 MAFGO15525 162 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 NTSR2O95665 410 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 GGPS1O95749 300 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 SLC4A1P02730 911 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 RASSF7Q02833 373 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 DRP2Q13474 957 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 CEP55Q53EZ4 464 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 NXNQ6DKJ4 435 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 DEFB132Q7Z7B7 95 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 SCFD2Q8WU76 684 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 LXNQ9BS40 222 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 HAUS8Q9BT25 410 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 GBA2Q9HCG7 927 aaPredicted RBP11.51□□□□□ -0.57
COLCA1-203ENST00000532918 MOSPD1Q9UJG1 213 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 MID2Q9UJV3 735 aa11.51□□□□□ -0.57
COLCA1-203ENST00000532918 PIN4Q9Y237 131 aaKnown RBP11.51□□□□□ -0.57
COLCA1-203ENST00000532918 GSG1L2A8MUP6 293 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SNAP23O00161 211 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SLC16A4O15374 487 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SLC26A4O43511 780 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 STAG3L1P0CL83 205 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SNX17Q15036 470 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 TRIM42Q8IWZ5 723 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SPZ1Q9BXG8 430 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 DCDC2CA8MYV0 355 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 GPC4O75487 556 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 PSMA2P25787 234 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 PEX19P40855 299 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 RABL6Q3YEC7 729 aaPredicted RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SLC38A7Q9NVC3 462 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 MTMR4Q9NYA4 1195 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 TLK1Q9UKI8 766 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 MAN1B1Q9UKM7 699 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 DTNBO60941 627 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 TADA2AO75478 443 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SKIP12755 728 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SOX5P35711 763 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 DGKDQ16760 1214 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SGO2Q562F6 1265 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 RHOT2Q8IXI1 618 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SRRM1Q8IYB3 904 aaKnown RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 N4BP2L2Q92802 583 aaPredicted RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 LRRD1A4D1F6 860 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 TXNDC9O14530 226 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 ZBED1O96006 694 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 RASSF2P50749 326 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 NKX1-1Q15270 411 aaPredicted RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 MAGOHBQ96A72 148 aaKnown RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 FAM213AQ9BRX8 229 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 RFC5P40937 340 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 KRT17Q04695 432 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 ITPK1Q13572 414 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 TFDP2Q14188 446 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 ENOSF1Q7L5Y1 443 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SFR1Q86XK3 245 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 ENOX1Q8TC92 643 aaKnown RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 ARHGEF2Q92974 986 aaKnown RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
COLCA1-203ENST00000532918 SUCLA2Q9P2R7 463 aaPredicted RBP11.5□□□□□ -0.57
COLCA1-203ENST00000532918 CEP170BQ9Y4F5 1589 aaPredicted RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 LAMC2Q13753 1193 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 BAATQ14032 418 aaPredicted RBP11.49□□□□□ -0.57
COLCA1-203ENST00000532918 ERO1BQ86YB8 467 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 VPS33BQ9H267 617 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 PPP2R2CQ9Y2T4 447 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 CEP152O94986 1710 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 TECPR2O15040 1411 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 ZNF521Q96K83 1311 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 RPS6KA5O75582 802 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 DGAT1O75907 488 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 ZBED6P86452 979 aa11.49□□□□□ -0.57
COLCA1-203ENST00000532918 EHHADHQ08426 723 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms