RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 GCFC2P16383 781 aaKnown RBP20■□□□□ 0.79
SMG1-203ENST00000532700 XBP1P17861 261 aa20■□□□□ 0.79
SMG1-203ENST00000532700 EIF4BP23588 611 aaKnown RBP20■□□□□ 0.79
SMG1-203ENST00000532700 PSMC5P62195 406 aa20■□□□□ 0.79
SMG1-203ENST00000532700 DYDC2Q96IM9 177 aa20■□□□□ 0.79
SMG1-203ENST00000532700 FAM20AQ96MK3 541 aa20■□□□□ 0.79
SMG1-203ENST00000532700 TNFRSF10AO00220 468 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 GPR182O15218 404 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 MAFO75444 373 aaPredicted RBP19.99■□□□□ 0.79
SMG1-203ENST00000532700 ATF7P17544 494 aaPredicted RBP19.99■□□□□ 0.79
SMG1-203ENST00000532700 KCNA5P22460 613 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 IRS1P35568 1242 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 FAM189BP81408 668 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 CYP4A11Q02928 519 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 CTTNQ14247 550 aaKnown RBP19.99■□□□□ 0.79
SMG1-203ENST00000532700 NCAPH2Q6IBW4 605 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 SLC24A5Q71RS6 500 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 KLHL23Q8NBE8 558 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.99■□□□□ 0.79
SMG1-203ENST00000532700 WASF1Q92558 559 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 LXNQ9BS40 222 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 TMEM60Q9H2L4 133 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 CD320Q9NPF0 282 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 LRFN2Q9ULH4 789 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 PLAGL2Q9UPG8 496 aa19.99■□□□□ 0.79
SMG1-203ENST00000532700 A0A087WWV3 80 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 A0A087WZ62 844 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 TBKBP1A7MCY6 615 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 H3BQ06 376 aaPredicted RBP19.98■□□□□ 0.79
SMG1-203ENST00000532700 STAG3L1P0CL83 205 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 QARSP47897 775 aaKnown RBP19.98■□□□□ 0.79
SMG1-203ENST00000532700 HYAL1Q12794 435 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 COL19A1Q14993 1142 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 LRRC55Q6ZSA7 311 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 ADGRD2Q7Z7M1 963 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 NLRP7Q8WX94 980 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 KHSRPQ92945 711 aaKnown RBP eCLIP19.98■□□□□ 0.79
SMG1-203ENST00000532700 FDXACB1Q9BRP7 624 aaPredicted RBP19.98■□□□□ 0.79
SMG1-203ENST00000532700 C11orf84Q9BUA3 381 aaPredicted RBP19.98■□□□□ 0.79
SMG1-203ENST00000532700 CYP26B1Q9NR63 512 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 LIMCH1Q9UPQ0 1083 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 PCDHB7Q9Y5E2 793 aa19.98■□□□□ 0.79
SMG1-203ENST00000532700 TBX3O15119 743 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 LINC01565O15544 149 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 RB1P06400 928 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 TMOD1P28289 359 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 LTBRP36941 435 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 DLX2Q07687 328 aaPredicted RBP19.97■□□□□ 0.79
SMG1-203ENST00000532700 PTPROQ16827 1216 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 TIGD5Q53EQ6 642 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 CLLU1OSQ5K130 101 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 SPPL3Q8TCT6 385 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 NSUN3Q9H649 340 aaKnown RBP19.97■□□□□ 0.79
SMG1-203ENST00000532700 CWH43Q9H720 699 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 C1orf112Q9NSG2 853 aa19.97■□□□□ 0.79
SMG1-203ENST00000532700 IL9P15248 144 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 PBX3P40426 434 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 EPHA7Q15375 998 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 ECHDC2Q86YB7 292 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 RHPN2Q8IUC4 686 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 TMEM143Q96AN5 459 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 SCLT1Q96NL6 688 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 CASD1Q96PB1 797 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 MINDY3Q9H8M7 445 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 TYW1Q9NV66 732 aaKnown RBP19.96■□□□□ 0.79
SMG1-203ENST00000532700 TMEM161AQ9NX61 479 aa19.96■□□□□ 0.79
SMG1-203ENST00000532700 SUCLA2Q9P2R7 463 aaPredicted RBP19.96■□□□□ 0.79
SMG1-203ENST00000532700 MEIS3P2A8K0S8 358 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 SLITRK3O94933 977 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 CD2BP2O95400 341 aaKnown RBP19.95■□□□□ 0.78
SMG1-203ENST00000532700 P4HBP07237 508 aaKnown RBP19.95■□□□□ 0.78
SMG1-203ENST00000532700 AAK1Q2M2I8 961 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 ZNF598Q86UK7 904 aaKnown RBP19.95■□□□□ 0.78
SMG1-203ENST00000532700 NEK9Q8TD19 979 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 NLRP4Q96MN2 994 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 MTMR9Q96QG7 549 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 PLVAPQ9BX97 442 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 DHX33Q9H6R0 707 aaKnown RBP19.95■□□□□ 0.78
SMG1-203ENST00000532700 IFT122Q9HBG6 1241 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 XPNPEP1Q9NQW7 623 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 RWDD3Q9Y3V2 267 aa19.95■□□□□ 0.78
SMG1-203ENST00000532700 POTEMA6NI47 508 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 TBX10O75333 385 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 ATP2B1P20020 1258 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 YWHABP31946 246 aaKnown RBP19.94■□□□□ 0.78
SMG1-203ENST00000532700 CALCRLQ16602 461 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 LEXMQ3ZCV2 418 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 LONRF3Q496Y0 759 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 C4orf19Q8IY42 314 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 COLGALT1Q8NBJ5 622 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 RNF169Q8NCN4 708 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 POF1BQ8WVV4 589 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 P2RX5Q93086 422 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 CEP170P1Q96L14 293 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 EIF2AK1Q9BQI3 630 aaKnown RBP19.94■□□□□ 0.78
SMG1-203ENST00000532700 ATP6V0A4Q9HBG4 840 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 BRMS1Q9HCU9 246 aa19.94■□□□□ 0.78
SMG1-203ENST00000532700 TXKP42681 527 aa19.93■□□□□ 0.78
SMG1-203ENST00000532700 RBM10P98175 930 aaKnown RBP19.93■□□□□ 0.78
SMG1-203ENST00000532700 NBR1Q14596 966 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms