RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 RNF219Q5W0B1 726 aaPredicted RBP15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 SPATS2Q86XZ4 545 aaKnown RBP15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 MIPOL1Q8TD10 442 aa15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 POLR3FQ9H1D9 316 aaPredicted RBP15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 MED4Q9NPJ6 270 aa15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 HUS1O60921 280 aa15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 NDST4Q9H3R1 872 aa15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 SART1O43290 800 aaKnown RBP15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 COASYQ13057 564 aa15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 TTC25Q96NG3 672 aa15.88■□□□□ 0.13
PCDHA9-202ENST00000532602 RABL6Q3YEC7 729 aaPredicted RBP15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 CEP120Q8N960 986 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 LXNQ9BS40 222 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 ZNF609O15014 1411 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 BASP1P80723 227 aaKnown RBP15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 KRT31Q15323 416 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 TMTC4Q5T4D3 741 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 TTC39CQ8N584 583 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 BEST2Q8NFU1 509 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 ZBBXA8MT70 800 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 GCLMP48507 274 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 ATP1A2P50993 1020 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 GNGT1P63211 74 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 SF3B3Q15393 1217 aaKnown RBP15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 TTC30AQ86WT1 665 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 RHOT2Q8IXI1 618 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 SAAL1Q96ER3 474 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 WDR19Q8NEZ3 1342 aa15.87■□□□□ 0.13
PCDHA9-202ENST00000532602 ASB14A6NK59 587 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 IPO5O00410 1097 aaKnown RBP15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 TTC4O95801 387 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 MSH2P43246 934 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 MB21D1Q8N884 522 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 DHX38Q92620 1227 aaKnown RBP15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 STK36Q9NRP7 1315 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 TTC19Q6DKK2 380 aaPredicted RBP15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 EIF2AK1Q9BQI3 630 aaKnown RBP15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 PRDM5Q9NQX1 630 aaPredicted RBP15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 PCDHA13Q9Y5I0 950 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 DPYSL4O14531 572 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 KIF3CO14782 793 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 HSPA8P11142 646 aaKnown RBP15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 CYP27A1Q02318 531 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 INTS5Q6P9B9 1019 aaKnown RBP15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 UNC13DQ70J99 1090 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 ZBED1O96006 694 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 TMEM35BQ8NCS4 154 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 MYOZ2Q9NPC6 264 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 PRCPP42785 496 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 XXYLT1Q8NBI6 393 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 VPS39Q96JC1 886 aa15.86■□□□□ 0.13
PCDHA9-202ENST00000532602 GPC3P51654 580 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 ALX1Q15699 326 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 RWDD4Q6NW29 188 aaKnown RBP15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 OR6J1Q8NGC5 347 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 ABCF3Q9NUQ8 709 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 FAN1Q9Y2M0 1017 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 CD163L1Q9NR16 1453 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 KCNV1Q6PIU1 500 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 TOGARAM2Q6ZUX3 1019 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 RAET1EQ8TD07 263 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 KCNH4Q9UQ05 1017 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 PMLP29590 882 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 RABGGTAQ92696 567 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 Q9H521 79 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 TNPO2O14787 897 aaKnown RBP15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 COG7P83436 770 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 TRIM28Q13263 835 aaKnown RBP15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 SLC15A2Q16348 729 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 SCN4BQ8IWT1 228 aa15.85■□□□□ 0.13
PCDHA9-202ENST00000532602 P4HBP07237 508 aaKnown RBP15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 SLMAPQ14BN4 828 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 LRRC31Q6UY01 552 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 COL23A1Q86Y22 540 aaPredicted RBP15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 NEDD1Q8NHV4 660 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 LRGUKQ96M69 825 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 TTI1O43156 1089 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 NR3C1P04150 777 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 QARSP47897 775 aaKnown RBP15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 PCGF5Q86SE9 256 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 NGRNQ9NPE2 291 aaKnown RBP15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 IRAK4Q9NWZ3 460 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 ORC4O43929 436 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 TEX2Q8IWB9 1127 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 RFX7Q2KHR2 1363 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 EVI5O60447 810 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 PDIA6Q15084 440 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 PDIK1LQ8N165 341 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 AP1M1Q9BXS5 423 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 FOXN1O15353 648 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 CSF1RP07333 972 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 EPHB4P54760 987 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 TFDP2Q14188 446 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 PROM2Q8N271 834 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 GCOM2Q9BZD3 368 aaPredicted RBP15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 MTIF3Q9H2K0 278 aaKnown RBP15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 MTMR4Q9NYA4 1195 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 RGL1Q9NZL6 768 aa15.84■□□□□ 0.13
PCDHA9-202ENST00000532602 SEL1LQ9UBV2 794 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms