RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CNOT10Q9H9A5 744 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 ADAM22Q9P0K1 906 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 VSNL1P62760 191 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 PKN1Q16512 942 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 KRT39Q6A163 491 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 VPS52Q8N1B4 723 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 CALR3Q96L12 384 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 RASGRF2O14827 1237 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 CLDN3O15551 220 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 IFT88Q13099 833 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 PDZD4Q76G19 769 aaPredicted RBP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 CCHCR1Q8TD31 782 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 FAM213AQ9BRX8 229 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 ODF2LQ9ULJ1 636 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 A6NJR5 290 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 SLC16A3O15427 465 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 MARK3P27448 753 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 SLCO1A2P46721 670 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 YWHAGP61981 247 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 RNF169Q8NCN4 708 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 CCDC197Q8NCU1 140 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 APOL6Q9BWW8 343 aa16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-202ENST00000532566 UBR1Q8IWV7 1749 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 CD44P16070 742 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 SOX5P35711 763 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 ILDR1Q86SU0 546 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 TCP11Q8WWU5 503 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 RFFLQ8WZ73 363 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 FAM167AQ96KS9 214 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 DDX47Q9H0S4 455 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 PACSIN2Q9UNF0 486 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 SNX24Q9Y343 169 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 PITPNM2Q9BZ72 1349 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 TARSL2A2RTX5 802 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 SUN1O94901 812 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 RPA1P27694 616 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 NCAPHQ15003 741 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 ERGIC2Q96RQ1 377 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 PLAAQ9Y263 795 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 ESYT3A0FGR9 886 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 FTLP02792 175 aaPredicted RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 IL9RQ01113 521 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 ARMC9Q7Z3E5 817 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 THNSL1Q8IYQ7 743 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 RPF1Q9H9Y2 349 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 PCDHA10Q9Y5I2 948 aa16.47■□□□□ 0.23
PCDHA3-202ENST00000532566 SCARA5Q6ZMJ2 495 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 LRRC8CQ8TDW0 803 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 FAM149B1Q96BN6 582 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 CALN1Q9BXU9 219 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 RTFDC1Q9BY42 306 aaPredicted RBP16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 ZNRF3Q9ULT6 936 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 MCF2LO15068 1137 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 GGCXP38435 758 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 TRIP13Q15645 432 aaPredicted RBP16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 GPR162Q16538 588 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 MAPK6Q16659 721 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 ZNF746Q6NUN9 644 aaPredicted RBP16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 COG1Q8WTW3 980 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 FAM151AQ8WW52 585 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 ZRANB2O95218 330 aaKnown RBP eCLIP16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 REXO1L1PQ8IX06 675 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 NSMCE1Q8WV22 266 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 TBC1D31Q96DN5 1066 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 SAAL1Q96ER3 474 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 FAM217BQ9NTX9 383 aaPredicted RBP16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 TRIM10Q9UDY6 481 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 MAD1L1Q9Y6D9 718 aa16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.46■□□□□ 0.23
PCDHA3-202ENST00000532566 A0A1W2PQJ5 194 aa16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 SART1O43290 800 aaKnown RBP16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 GYS1P13807 737 aa16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 UCHL3P15374 230 aa16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 HDLBPQ00341 1268 aaKnown RBP16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 GEN1Q17RS7 908 aa16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 ERICH1Q86X53 443 aa16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 CCDC117Q8IWD4 279 aaPredicted RBP16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 KBTBD4Q9NVX7 518 aa16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 POLLQ9UGP5 575 aa16.46■□□□□ 0.22
PCDHA3-202ENST00000532566 INHBAP08476 426 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 DYNLT1P63172 113 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 TMEM35BQ8NCS4 154 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 LPAR1Q92633 364 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 RILPQ96NA2 401 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 ACAD9Q9H845 621 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 PFASO15067 1338 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 ANXA13P27216 316 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 A0A1B0GUA9 196 aa16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 WDR46O15213 610 aaKnown RBP16.45■□□□□ 0.22
PCDHA3-202ENST00000532566 ZNF667Q5HYK9 610 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms